Parental gene: | EAPP, ENSCPOG00000003005 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_23:2013364..2041263(-) |
>ENSCPOG00000003005
ATGAGCCGGCTCCAGGATGACTACGACCCCTATGCAGTTGAAGAGCCTAGCGACGAGGAGCCAGCTTTGAGCAGCTCTGA
AGATGAAGTGGATGTGCTTTTACATGGAACCCCTGACCAGAAACGAAAACTCATCAGAGAGTGTCTTACTGGAGAAAGTG
AGTCCTCTAGTGAAGATGAGTTTGAAAAAGAAATGGAAGCTGAGTTAAATTCCACCATAAAAACAATGGAGGACAAACTC
TCTTCCCTTGGAACAGGGTCTTCCTCAGGAAATGGAAATGTGGGAATAGCTCCAGCAAAGTACTATGATGATGTATATTT
TGATTCTGATTCTGAGGATGAAGACAAAGCAGCACAGGTAACAAAGAAGAAAAAGAAGAGACGACACAGAATTCTAACAA
ATGATGAATTACTATACGATCCTGATAAAGATAACAGAGACCAGGCATGGGTTGATGCACAGAGAAGAGGCTATCATGGT
TTTGGACTACAGAGACCACGTCAGCAGCAACAGCCGGTTCCTAACAGTGATGCTGTCTTAAATTGCCCTGCTTGTATGAC
TACATTGTGCCTCGATTGCCAAAGGCATGAGTCTTACAAAACTCAGTACAGAGCAATGTTTGTGATGAACTGTTCCATCA
ACAGAGAGGAGGTACTAAGATACAAAAACCCAGACAACAGAAAGAAGAGACGGGGCTACAAGAAGCTGCGATCTAACCAG
GAAGATCCGAAGAAGCAGACCGAAGCTGAAGAAATCTACCACCCTGTGATGTGTGCAGAGTGTTCCACTGAAGTGGCCGT
CTACGACAAGGACGAAGTCTTTCACTTTTTCAACGTTTTAGCAAGCCATTCT
ATGAGCCGGCTCCAGGATGACTACGACCCCTATGCAGTTGAAGAGCCTAGCGACGAGGAGCCAGCTTTGAGCAGCTCTGA
AGATGAAGTGGATGTGCTTTTACATGGAACCCCTGACCAGAAACGAAAACTCATCAGAGAGTGTCTTACTGGAGAAAGTG
AGTCCTCTAGTGAAGATGAGTTTGAAAAAGAAATGGAAGCTGAGTTAAATTCCACCATAAAAACAATGGAGGACAAACTC
TCTTCCCTTGGAACAGGGTCTTCCTCAGGAAATGGAAATGTGGGAATAGCTCCAGCAAAGTACTATGATGATGTATATTT
TGATTCTGATTCTGAGGATGAAGACAAAGCAGCACAGGTAACAAAGAAGAAAAAGAAGAGACGACACAGAATTCTAACAA
ATGATGAATTACTATACGATCCTGATAAAGATAACAGAGACCAGGCATGGGTTGATGCACAGAGAAGAGGCTATCATGGT
TTTGGACTACAGAGACCACGTCAGCAGCAACAGCCGGTTCCTAACAGTGATGCTGTCTTAAATTGCCCTGCTTGTATGAC
TACATTGTGCCTCGATTGCCAAAGGCATGAGTCTTACAAAACTCAGTACAGAGCAATGTTTGTGATGAACTGTTCCATCA
ACAGAGAGGAGGTACTAAGATACAAAAACCCAGACAACAGAAAGAAGAGACGGGGCTACAAGAAGCTGCGATCTAACCAG
GAAGATCCGAAGAAGCAGACCGAAGCTGAAGAAATCTACCACCCTGTGATGTGTGCAGAGTGTTCCACTGAAGTGGCCGT
CTACGACAAGGACGAAGTCTTTCACTTTTTCAACGTTTTAGCAAGCCATTCT
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 16 .45 RPM |
| SRP017611_kidney | 22 .40 RPM |
| SRP017611_brain | 16 .39 RPM |
| SRP040447_lung | 23 .71 RPM |
| SRP040447_skeletal_muscle | 9 .74 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000005391 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000013814 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000014525 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000001029 | ortholog_one2many | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000003226 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000005273 | ortholog_one2one | 2 retrogenes | |
| Tupaia belangeri | ENSTBEG00000001306 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_898 | 87.50 | 81.69 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000003005 retrocopies