Parental gene:

PIGH, ENSCPOG00000003328

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_20:12283493..12308586(-)


>ENSCPOG00000003328
ATGGAGGACGAGAGGATCTTCTCGGATATCTGCGGCGGCCGTCTGGCCCTGCAGCGCCGCTACTACTCGTCTTTCTGCCG
GGAGTTCTGCGTCAGCTGCCCTCGGCTCTCGTTGCGCTCGCTCACCTCTGTCACCTGCACAGTGTGGCTAGTAGCCTACG
GACTCTTCACTCTGTGCGAGAACAGCACGATCCTCTCAGCAGCCATCTTCATCACTGTCTTAGGCCTGCTTGGTTACCTC
CATTTTGTGAAGATTGATCAGGAGACTCTGTTAATCATTGATTCTCTTGGCATCCAAATGACCTCATCCTATGCTTCAGG
CAAAGAAAACACTACCTTCATAGAGATGGACAAAGTCAAGGACATTGTCATTAACGAGGCTATTTACATGCAGAAGGTGA
TTTACTACCTCTGTATTTTACTGAAGGATCCACGGGAACCACAGAAGATATCTCAAGTAGTACCTGTCTTCCAGAGTGCC
AAGCCCCGGCTGGACTGCTTAATTGAGGTGTACAAGAGCTGCCAGGAAGTTCTGGCGCATCAGAAAGCCACAACAACAAG
GTCATGA

Library Parental gene expression (RPM)
SRP017611_liver 1 .96 RPM
SRP017611_kidney 7 .33 RPM
SRP017611_brain 10 .30 RPM
SRP040447_lung 3 .68 RPM
SRP040447_skeletal_muscle 1 .06 RPM



Species Parental gene accession Homology type Retrogenes number
Echinops telfairi ENSETEG00000008623 ortholog_one2one 1 retrogene
retro_etel_844,
Homo sapiens ENSG00000100564 ortholog_one2one 1 retrogene
retro_hsap_1506,
Gorilla gorilla ENSGGOG00000001507 ortholog_one2one 1 retrogene
retro_ggor_1155,
Macropus eugenii ENSMEUG00000011325 ortholog_one2one 1 retrogene
retro_meug_2130,
Myotis lucifugus ENSMLUG00000004467 ortholog_one2one 1 retrogene
retro_mluc_910,
Nomascus leucogenys ENSNLEG00000000739 ortholog_one2one 1 retrogene
retro_nleu_1747,
Pongo abelii ENSPPYG00000005925 ortholog_one2one 1 retrogene
retro_pabe_1255,
Pan troglodytes ENSPTRG00000006466 ortholog_one2one 1 retrogene
retro_ptro_1020,
Tarsius syrichta ENSTSYG00000008465 ortholog_one2one 1 retrogene
retro_tsyr_1926,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_815 53.73 70.21
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Download FASTA sequences of all ENSCPOG00000003328 retrocopies