Parental gene:

RHEB, ENSCPOG00000007541

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_32:1076384..1111985(-)


>ENSCPOG00000007541
ATGCCGCAGTCCAAGTCCCGGAAGATCGCGATCCTTGGCTACCGGTCTGTGGGGAAATCCTCATTGACAATTCAGTTTGT
TGAAGGCCAGTTTGTTGACTCCTATGACCCAACCATAGAAAACACTTTCACAAAGTTGATCACAGTAAATGGACAAGAAT
ATCATCTTCAGCTCGTAGATACAGCTGGGCAAGATGAATATTCCATTTTCCCTCAGACATACTCCATAGATATTAACGGA
TATATTCTTGTGTATTCTGTTACATCAATCAAAAGTTTTGAAGTGATTAAAGTTATCCATGGCAAATTGTTGGACATGGT
GGGGAAAGTGCAAATACCTATTATGTTGGTTGGGAATAAAAAAGACCTGCATATGGAAAGGGTGATCAGTTATGAAGAAG
GGAAAGCTTTGGCAGAATCGTGGAATGCAGCTTTTTTGGAATCTTCTGCTAAAGAAAATCAGACTGCCGTCGATGTTTTC
AGAAGGATAATTTTGGAGGCAGAAAAGATGGATGGGGCAGCTTCACAAGGCAAGTCCTCGTGCTCGGTGATG

Library Parental gene expression (RPM)
SRP017611_brain 50 .73 RPM
SRP017611_kidney 56 .22 RPM
SRP017611_liver 30 .64 RPM
SRP040447_lung 50 .29 RPM
SRP040447_skeletal_muscle 43 .24 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000031861 ortholog_one2one 1 retrogene
retro_btau_373,
Callithrix jacchus ENSCJAG00000020414 ortholog_one2one 1 retrogene
retro_cjac_1694,
Cavia porcellus ENSCPOG00000002998 within_species_paralog 1 retrogene
retro_cpor_1328,
Dasypus novemcinctus ENSDNOG00000016493 ortholog_one2one 1 retrogene
retro_dnov_2542,
Homo sapiens ENSG00000106615 ortholog_one2one 2 retrogenes
retro_hsap_568, retro_hsap_570,
Gorilla gorilla ENSGGOG00000014675 ortholog_one2many 1 retrogene
retro_ggor_149,
Loxodonta africana ENSLAFG00000000691 ortholog_one2one 1 retrogene
retro_lafr_471,
Macropus eugenii ENSMEUG00000011774 ortholog_one2one 1 retrogene
retro_meug_172,
Myotis lucifugus ENSMLUG00000004309 ortholog_one2one 2 retrogenes
retro_mluc_2140, retro_mluc_857,
Mus musculus ENSMUSG00000028945 ortholog_one2one 1 retrogene
retro_mmus_1779,
Oryctolagus cuniculus ENSOCUG00000013173 ortholog_one2one 1 retrogene
retro_ocun_1309,
Ictidomys tridecemlineatus ENSSTOG00000004544 ortholog_one2one 2 retrogenes
retro_itri_1251, retro_itri_1357,
Tarsius syrichta ENSTSYG00000001286 ortholog_one2one 2 retrogenes
retro_tsyr_1174, retro_tsyr_1848,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_287 65.00 52.72
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2. retro_cpor_787 87.59 78.26
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Download FASTA sequences of all ENSCPOG00000007541 retrocopies