RetrogeneDB ID: | retro_mluc_2140 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL430058:396106..396607(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMLUG00000024422 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RHEB | ||
Ensembl ID: | ENSMLUG00000004309 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 99.4 % |
Parental protein coverage: | 93.3 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | GKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQEYHLQLVDTAGQDEYSIFPQTYSIDINGYILVYSV |
GKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQEYHLQLVDTAGQDEYSIFPQTYSIDINGYILVYSV | |
Retrocopy | GKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQEYHLQLVDTAGQDEYSIFPQTYSIDINGYILVYSV |
Parental | TSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNKKDLHMERVISYEEGKALAESWNAAFLESSAKENQTAV |
TSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNKKDLH.ERVISYEEGKALAESWNAAFLESSAKENQTAV | |
Retrocopy | TSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNKKDLHLERVISYEEGKALAESWNAAFLESSAKENQTAV |
Parental | DVFRRIILEAEKIDGAASQGKSSCSVM |
DVFRRIILEAEKIDGAASQGKSSCSVM | |
Retrocopy | DVFRRIILEAEKIDGAASQGKSSCSVM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Bos taurus | ENSBTAG00000031861 | 1 retrocopy | |
Callithrix jacchus | ENSCJAG00000020414 | 1 retrocopy | |
Cavia porcellus | ENSCPOG00000007541 | 2 retrocopies | |
Dasypus novemcinctus | ENSDNOG00000016493 | 1 retrocopy | |
Homo sapiens | ENSG00000106615 | 2 retrocopies | |
Gorilla gorilla | ENSGGOG00000014675 | 1 retrocopy | |
Loxodonta africana | ENSLAFG00000000691 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000011774 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000004309 | 2 retrocopies |
retro_mluc_2140 , retro_mluc_857,
|
Mus musculus | ENSMUSG00000028945 | 1 retrocopy | |
Oryctolagus cuniculus | ENSOCUG00000013173 | 1 retrocopy | |
Ictidomys tridecemlineatus | ENSSTOG00000004544 | 2 retrocopies | |
Tarsius syrichta | ENSTSYG00000001286 | 2 retrocopies |