Parental gene:

ENSCPOG00000013520

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_4:8291719..8292367(+)


>ENSCPOG00000013520
ATGCCGATGTTCATCTTGAATACCAACGTGCCCCGCAGCTCCGTGCCGGACGGGTTCCTCTCCGAGCTCACGCAGCAGCT
GGCGCAGGCCACCGGCAAGCCCGCCCAGTACATCGCAGTGCACGTGGTCCCGGACCAGCTCATGACCTTCGCGGGCTCAT
CGGAGCCCTGCGCGCTCTGCAGCCTGCACAGCATCGGCAAGATAGGCGGCGCGCAGAATCGCTCTTACAGCAAGCTGCTG
TGTGGTCTGCTGTCCGAGCGCCTGCGCATCAGTCCGGATAGGGTCTATATCAACTATTATGACATGAACGCTGCCAACGT
GGGCTGGAACAGCACCACCTTCGGTTGA

Library Parental gene expression (RPM)
SRP017611_brain 46 .19 RPM
SRP017611_kidney 85 .11 RPM
SRP017611_liver 26 .51 RPM
SRP040447_lung 45 .20 RPM
SRP040447_skeletal_muscle 34 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000010668 ortholog_many2many 3 retrogenes
retro_cjac_2903, retro_cjac_3132, retro_cjac_357,
Dasypus novemcinctus ENSDNOG00000014555 ortholog_many2many 1 retrogene
retro_dnov_36,
Equus caballus ENSECAG00000012792 ortholog_one2many 1 retrogene
retro_ecab_1122,
Echinops telfairi ENSETEG00000012052 ortholog_many2many 3 retrogenes
retro_etel_2001, retro_etel_2046, retro_etel_509,
Mus musculus ENSMUSG00000033307 ortholog_one2many 8 retrogenes
retro_mmus_1573, retro_mmus_1759, retro_mmus_1878, retro_mmus_2182, retro_mmus_2444, retro_mmus_3016, retro_mmus_3315, retro_mmus_489,
Ochotona princeps ENSOPRG00000012184 ortholog_one2many 1 retrogene
retro_opri_968,
Rattus norvegicus ENSRNOG00000006589 ortholog_many2many 6 retrogenes
retro_rnor_137, retro_rnor_1608, retro_rnor_1644, retro_rnor_2263, retro_rnor_31, retro_rnor_361,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_879 75.65 99.13
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Download FASTA sequences of all ENSCPOG00000013520 retrocopies