Parental gene: | DEPDC1, ENSCPOG00000013839 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_2:65473333..65490388(+) |
>ENSCPOG00000013839
ATGGAGAGTCGCGGGGGGCCTCCCGGGCCCTACCGGGCCACCAAGCTGTGGAATGAAGTAACCACATCTTTCCGAGCAGG
AATGCCCCTGAGAAAACACAGGCAACACTTTAAAAAATACGGAAACTGCTTCACAGCAGGGGAAGCCGTGGATTGGCTTT
ATGACCTATTAAGAAATAATAGCAATTTTGGTCCTGAAGTTACGAGGCAACAGACTATTCAACTATTGAGAAAATTTCTT
AAAAATCATGTAATTGAAGATATCAAAGGCAGATGGGGATCAGAAAATCTCGATGACAATAATCAGCTATTCAGGTTTCC
TGCAACTTCTCCACTTAAATCACTTCCACGAAGGCATCCAGAGTTGAGAAAAGGCAGCATCGACAGTTTTTCGAAAGACA
AAGAGAATGTTTTTAAATTACGAAACTTGACTCGTAGAACTCCCAAGAAGCATGGCTTACATTTCTCTCAGGAAACTACA
GAGAAAATAAATCATGAAATCAAAGAAGATCAAGAAAACTTAGGAGATTATAGAGAAATAAGCCAGGAGGATGTCGAAGA
AGTTTGGAGATACGTTATTCTGATCTACCTGCAAACCATTTTGTGTGTACCATCCCTAGAAGAACTCATAAATCCAAACC
AAGTAATTCCCCAGTACGTGATGTACAACATGGCCAACACGAGTAAGCGTGGAGTGGTTATACTACAGGACAGATCAGAA
GACCTTCCTCACTGGGTGTTATCTGCCATGAAGTGCCTAGCAAATTGGCCAAGAAGCAATGATGCGTGTCATCCAGCTTA
CGTTGGCTTTGAGCGAGATGTGTTCAGAACAGTTGCTGATTATTTTCTCCATCTCCCTGAACCTCTACTTACATATGAAT
ATTATGAATTATTTGTGAACATTTTGGTTGTGTGTGGCTGCATCACAGTTTCAGATAGACCCAGTGGGACACATAAAATC
CAAGACGACCCACAGCCTTCAGAAACCCTTCACCTAACCAGTTCGCATTCCTTCAAGTCCACTGAGTGTCTTCTTCTCAG
TCTGCTTCACAGAGACAAAAGCAAAGAAGACTCAGACTTTCCCGAGAGACTCCAGTTAAGTGATCATGGATTTCAAGAAG
GACATGCTAAGAAAATGCAGCTAGTTAACCTAAGAAGCAGAAGAGTCAGGACCAGGGATGGGATGGGAGGAAGCTGTCAC
AGTCTGACAGGCTTGAGTAGCTCACGTGCTCTATCCGCTAGCATCAAGCCAAGGTGCTCGTCTTTGGAGGGAATTGTAGA
TACACCGGGCTATTCCTGTGCCAGGGTGTCCAGTGCTTTCCAGCACTCTGTTCTGAGTGCAGTACGACACAAAAGCGAAC
AGTGTTTAGAGTCAGAGCCCAAACAGGAGTCCCTGCTGGATCTGCATTCAGGGGGAAGGACTCACAAGCCACTCTGCAGT
GGCGGCTTCAGAAGAATTTCTGCTTTGACTGTCAGAGACCAAGAGGAGTCTGGTTCTGGGGACTGCAGGCCCCAACCACT
TTGCAGGTCTCAAAGTCTGCTGTTAAGGAGTAGCTCAAGACGGAACAGCTATGTAAATACACCCGTGGCGGAAGTCGTCA
TGAAACCAACTCTTGGACATGGCAGCACAAGGGTGCACAGAGCCATGGAAAGTGAACTCAGGGAGGATTGTGTCACAATC
AATAAAAGACTGTGCAAAAGTACTGTAGAACTCTCAGAAAACTCTTTACCTCCAGCTTCTGCTGTATTGACTGGCACACA
AAGCCTGCTGCAGCCCCACCTGGAGAGGGTCGCCGTCAGTGCGCTGCAGTTGTGCTGTCTGCTGCTTCCCCCGCCAAACC
GTAGGAAGCTCCAGCTCCTCATGCGCATGATGGCCCGCATGAGTGGAAACGTGGACCTGCCCAGACTGCACGACGCCATG
GGCACAAGGGCGCTGATGATACACACTTTTTCCCGGTGTGTGCTGTGCTGTGCAGAAGAAGTGGACCTGGACGAACTGCT
TGCTGCAAGATTAGTTTCCTTCCTAATGGATCATCAGCAGGAGATTCTTCAGGTGCCCTCTTACTTGCAGGCCGCAGTGG
ACAAACAACTGGACTGCTTACAGAAGGGCCAGGTAGGTACTGGGAGTCTCACAAATCCCCCTTCCTCATTTGCAGTGGCA
AACTCGTCTCAAACCAGCTCTATCACAAAA
ATGGAGAGTCGCGGGGGGCCTCCCGGGCCCTACCGGGCCACCAAGCTGTGGAATGAAGTAACCACATCTTTCCGAGCAGG
AATGCCCCTGAGAAAACACAGGCAACACTTTAAAAAATACGGAAACTGCTTCACAGCAGGGGAAGCCGTGGATTGGCTTT
ATGACCTATTAAGAAATAATAGCAATTTTGGTCCTGAAGTTACGAGGCAACAGACTATTCAACTATTGAGAAAATTTCTT
AAAAATCATGTAATTGAAGATATCAAAGGCAGATGGGGATCAGAAAATCTCGATGACAATAATCAGCTATTCAGGTTTCC
TGCAACTTCTCCACTTAAATCACTTCCACGAAGGCATCCAGAGTTGAGAAAAGGCAGCATCGACAGTTTTTCGAAAGACA
AAGAGAATGTTTTTAAATTACGAAACTTGACTCGTAGAACTCCCAAGAAGCATGGCTTACATTTCTCTCAGGAAACTACA
GAGAAAATAAATCATGAAATCAAAGAAGATCAAGAAAACTTAGGAGATTATAGAGAAATAAGCCAGGAGGATGTCGAAGA
AGTTTGGAGATACGTTATTCTGATCTACCTGCAAACCATTTTGTGTGTACCATCCCTAGAAGAACTCATAAATCCAAACC
AAGTAATTCCCCAGTACGTGATGTACAACATGGCCAACACGAGTAAGCGTGGAGTGGTTATACTACAGGACAGATCAGAA
GACCTTCCTCACTGGGTGTTATCTGCCATGAAGTGCCTAGCAAATTGGCCAAGAAGCAATGATGCGTGTCATCCAGCTTA
CGTTGGCTTTGAGCGAGATGTGTTCAGAACAGTTGCTGATTATTTTCTCCATCTCCCTGAACCTCTACTTACATATGAAT
ATTATGAATTATTTGTGAACATTTTGGTTGTGTGTGGCTGCATCACAGTTTCAGATAGACCCAGTGGGACACATAAAATC
CAAGACGACCCACAGCCTTCAGAAACCCTTCACCTAACCAGTTCGCATTCCTTCAAGTCCACTGAGTGTCTTCTTCTCAG
TCTGCTTCACAGAGACAAAAGCAAAGAAGACTCAGACTTTCCCGAGAGACTCCAGTTAAGTGATCATGGATTTCAAGAAG
GACATGCTAAGAAAATGCAGCTAGTTAACCTAAGAAGCAGAAGAGTCAGGACCAGGGATGGGATGGGAGGAAGCTGTCAC
AGTCTGACAGGCTTGAGTAGCTCACGTGCTCTATCCGCTAGCATCAAGCCAAGGTGCTCGTCTTTGGAGGGAATTGTAGA
TACACCGGGCTATTCCTGTGCCAGGGTGTCCAGTGCTTTCCAGCACTCTGTTCTGAGTGCAGTACGACACAAAAGCGAAC
AGTGTTTAGAGTCAGAGCCCAAACAGGAGTCCCTGCTGGATCTGCATTCAGGGGGAAGGACTCACAAGCCACTCTGCAGT
GGCGGCTTCAGAAGAATTTCTGCTTTGACTGTCAGAGACCAAGAGGAGTCTGGTTCTGGGGACTGCAGGCCCCAACCACT
TTGCAGGTCTCAAAGTCTGCTGTTAAGGAGTAGCTCAAGACGGAACAGCTATGTAAATACACCCGTGGCGGAAGTCGTCA
TGAAACCAACTCTTGGACATGGCAGCACAAGGGTGCACAGAGCCATGGAAAGTGAACTCAGGGAGGATTGTGTCACAATC
AATAAAAGACTGTGCAAAAGTACTGTAGAACTCTCAGAAAACTCTTTACCTCCAGCTTCTGCTGTATTGACTGGCACACA
AAGCCTGCTGCAGCCCCACCTGGAGAGGGTCGCCGTCAGTGCGCTGCAGTTGTGCTGTCTGCTGCTTCCCCCGCCAAACC
GTAGGAAGCTCCAGCTCCTCATGCGCATGATGGCCCGCATGAGTGGAAACGTGGACCTGCCCAGACTGCACGACGCCATG
GGCACAAGGGCGCTGATGATACACACTTTTTCCCGGTGTGTGCTGTGCTGTGCAGAAGAAGTGGACCTGGACGAACTGCT
TGCTGCAAGATTAGTTTCCTTCCTAATGGATCATCAGCAGGAGATTCTTCAGGTGCCCTCTTACTTGCAGGCCGCAGTGG
ACAAACAACTGGACTGCTTACAGAAGGGCCAGGTAGGTACTGGGAGTCTCACAAATCCCCCTTCCTCATTTGCAGTGGCA
AACTCGTCTCAAACCAGCTCTATCACAAAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 0 .83 RPM |
| SRP017611_kidney | 1 .05 RPM |
| SRP017611_brain | 0 .52 RPM |
| SRP040447_lung | 2 .47 RPM |
| SRP040447_skeletal_muscle | 0 .29 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000024526 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000016316 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000017766 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000028175 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000009334 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000000934 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000001248 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000000847 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_735 | 77.02 | 84.35 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000013839 retrocopies