Parental gene: | FAU, ENSCPOG00000014711 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_42:5920979..5922704(-) |
>ENSCPOG00000014711
GTCCTCAACATGCAGCTCTTTGTCCGCGCCCAGGACCTACACACTCTCGAAGTGACGGGCCAGGAGACGGTCGCCCAGAT
CAAGGCTCATGTGGCCTCACTGGAGGGCATCGCACCGGAAGATCAAGTTGTGCTGTTGGCCGGCAAGCCGCTGGAGGATG
AGGCCACCCTGGGCCAGTGTGGCGTGGAAGCCCTGACCACTCTGGAAGTAGCTGGCCGCATGCTTGGAGGTAAAGTCCAT
GGTTCCCTGGCTCGAGCTGGAAAAGTGAGAGGTCAGACTCCCAAGGTGGCCAAACAGGAGAAGAAGAAGAAGAAGACAGG
CCGGGCCAAGCGTCGGATGCAATACAATCGGCGCTTCGTCAATGTAGTGCCCACCTTTGGCAAGAAGAAGGGCCCCAACG
CCAACTCTTAA
GTCCTCAACATGCAGCTCTTTGTCCGCGCCCAGGACCTACACACTCTCGAAGTGACGGGCCAGGAGACGGTCGCCCAGAT
CAAGGCTCATGTGGCCTCACTGGAGGGCATCGCACCGGAAGATCAAGTTGTGCTGTTGGCCGGCAAGCCGCTGGAGGATG
AGGCCACCCTGGGCCAGTGTGGCGTGGAAGCCCTGACCACTCTGGAAGTAGCTGGCCGCATGCTTGGAGGTAAAGTCCAT
GGTTCCCTGGCTCGAGCTGGAAAAGTGAGAGGTCAGACTCCCAAGGTGGCCAAACAGGAGAAGAAGAAGAAGAAGACAGG
CCGGGCCAAGCGTCGGATGCAATACAATCGGCGCTTCGTCAATGTAGTGCCCACCTTTGGCAAGAAGAAGGGCCCCAACG
CCAACTCTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 164 .88 RPM |
| SRP017611_kidney | 166 .35 RPM |
| SRP017611_brain | 91 .22 RPM |
| SRP040447_lung | 245 .58 RPM |
| SRP040447_skeletal_muscle | 185 .01 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000020807 | possible_ortholog | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000004481 | ortholog_one2many | 5 retrogenes | |
| Monodelphis domestica | ENSMODG00000010095 | ortholog_one2many | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000014878 | ortholog_many2many | 3 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000000131 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_269 | 74.24 | 96.32 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cpor_831 | 62.26 | 76.47 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cpor_1319 | 79.38 | 71.32 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000014711 retrocopies