RetrogeneDB ID: | retro_shar_523 | ||
Retrocopylocation | Organism: | Tasmanian devil (Sarcophilus harrisii) | |
Coordinates: | GL849790.1:1324895..1325278(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSHAG00000000131 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 57.04 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 2 |
Parental | MQLFVRAQALHTLEVTGQETVAQIKAHVASLEGIVPEDQVLLLGGSPLEDEAVLGQCGVEPLSTLEVAGR |
M.L.VRAQ.LHTLE..GQE..AQIKAH....EG...EDQVLL....PLEDEA.L..C..EPLSTLEVAG. | |
Retrocopy | M*LLVRAQTLHTLELMGQEMFAQIKAHMLFPEGVTLEDQVLL--PCPLEDEAILW*CEEEPLSTLEVAGW |
Parental | MLGGKVHGSLARAGKVRGQTPK-VAKQEKKKKKTGRAKRRMQYNRRFVNVV-PTFGKKKGPNANS |
ML............K..G..P...AKQE.KKKK.G..KRRMQY...FVN.V.P...KK.GPN..S | |
Retrocopy | ML--EITWPSGQSWKSEGSGPQ>MAKQE-KKKKSGPSKRRMQYK*HFVNIV>PIGKKK-GPNVHS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |