Parental gene: | C12orf43, ENSDNOG00000000382 |
| Aliases: | None |
| Description: | chromosome 12 open reading frame 43 [Source:HGNC Symbol;Acc:25719] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_3141:58847..68806(-) |
>ENSDNOG00000000382
ATGGCGGCTCCCACTGGCGCCATGAGCGATTCCGAAAGCAGCAGCAGTAGTAGCGACGCGGAGGAGTTGGCGCGTTGCCG
TGAAGCGGCGATGCCGGCTTGGGGCTTGGAGCAGCGACGCAAAGCCGAAAAGCCAAAAGCCGNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCCATTACCATCTCAGAAGTAGAGAAGGAACCAAC
AAAGGCTGAGGTACAGAAAGCTCACTCAGAGGACGATGGCTTCCGCCTCTTCTTCACATCCATCCCTGAAGCCGAGAAGG
AAGCTTCTCCCCAGCCCTGCCGAAAGCGACTCCCCTCCAGCTCCAGCGACAACAGCGACGAGGAGTGGAAGCGGTGCCAG
GAGGCAGCCGTGTCAGCTTCCGACATTCTCCAGGAGTCAGCCATCCACGGCCCTGTCAAGGTGATTAAAGAGGAAAAGAA
GCAGAAAAAGAAAGCCAAGAAGGAGGCCAGTACCACCTCGGCCACAGCCACCACCGCCACAGGCAGAGTCCAGGAGCAGG
AAAAGGAAGCAACCAAGCTTAATGGGGACCAGACATCACTTGGGATCAAAAAGAAGAAAAGGAAGAAAAAGGTCAAGAAG
GACAGTGAAGCTTCTGCCTTCCCACGAGCAAAGACGGCAGCAGCCGTGCCTGTAAACTGA
ATGGCGGCTCCCACTGGCGCCATGAGCGATTCCGAAAGCAGCAGCAGTAGTAGCGACGCGGAGGAGTTGGCGCGTTGCCG
TGAAGCGGCGATGCCGGCTTGGGGCTTGGAGCAGCGACGCAAAGCCGAAAAGCCAAAAGCCGNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCCATTACCATCTCAGAAGTAGAGAAGGAACCAAC
AAAGGCTGAGGTACAGAAAGCTCACTCAGAGGACGATGGCTTCCGCCTCTTCTTCACATCCATCCCTGAAGCCGAGAAGG
AAGCTTCTCCCCAGCCCTGCCGAAAGCGACTCCCCTCCAGCTCCAGCGACAACAGCGACGAGGAGTGGAAGCGGTGCCAG
GAGGCAGCCGTGTCAGCTTCCGACATTCTCCAGGAGTCAGCCATCCACGGCCCTGTCAAGGTGATTAAAGAGGAAAAGAA
GCAGAAAAAGAAAGCCAAGAAGGAGGCCAGTACCACCTCGGCCACAGCCACCACCGCCACAGGCAGAGTCCAGGAGCAGG
AAAAGGAAGCAACCAAGCTTAATGGGGACCAGACATCACTTGGGATCAAAAAGAAGAAAAGGAAGAAAAAGGTCAAGAAG
GACAGTGAAGCTTCTGCCTTCCCACGAGCAAAGACGGCAGCAGCCGTGCCTGTAAACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 4 .28 RPM |
| SRP012922_cerebellum | 9 .21 RPM |
| SRP012922_heart | 2 .55 RPM |
| SRP012922_kidney | 4 .93 RPM |
| SRP012922_liver | 2 .48 RPM |
| SRP012922_lung | 3 .36 RPM |
| SRP012922_quadricep_muscle | 1 .04 RPM |
| SRP012922_spleen | 4 .92 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Microcebus murinus | ENSMICG00000008728 | ortholog_one2one | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000009317 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_1611 | 78.85 | 58.30 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000000382 retrocopies