Parental gene:

TAF10, ENSDNOG00000000814

Aliases:None
Description:TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 30kDa [Source:HGNC Symbol;Acc:11543]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_2937:17347..18649(-)


>ENSDNOG00000000814
ATGAGCTGCAGCGGCCCCGGCGCGGACCCCGAGGCGGCGCCGGCCTCTGCCGCCTCGGCCCCGGGCCCGACACCCCCGGT
CTCGGTCTCCGCCGCGCTGCCTGCCAGCGCCGCCGCAGAGAACAAGGCCAGCCCCGCAGGGACAGCGGGGGGGGCTGGGG
CTGGAGCCGCGGCTGGGGGCACGGGACCCGTGGCGGCGCGGGCCGGGGAGCCGGCCGAGCGGCGCGGGGCGGCTCCGGTG
TCGGCGGGCGGTGCGGCACCCCCGGAGGGTGCCATGTCTAACGGAGTTTACGTACTGCCGAGCGCGGCCAACGGAGAGGT
GAAGCCGGTGGTGTCCAGCACACCTCTGGTGGACTTCCTGATGCAGCTGGAGGATTACACGCCTACGATCCCAGATGCAG
TGACTGGTTACTATCTGAACCGTGCTGGCTTTGAGGCCTCAGACCCACGAATAATTCGGCTCATCTCCCTAGCTGCCCAG
AAATTCATCTCAGATATTGCCAACGATGCCCTACAGCACTGCAAAATGAAGGGCACAGCCTCTGGCAGCTCCCGAAGCAA
GAGCAAGGACCGCAAGTATACTTTAACCATGGAGGACCTGACCCCTGCCCTCAGCGAGTATGGCATCAATGTGAAGAAGC
CGCACTATTTCACCTGA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 79 .34 RPM
SRP012922_cerebellum 44 .40 RPM
SRP012922_heart 38 .75 RPM
SRP012922_kidney 122 .39 RPM
SRP012922_liver 46 .75 RPM
SRP012922_lung 72 .39 RPM
SRP012922_quadricep_muscle 37 .56 RPM
SRP012922_spleen 74 .06 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000016278 ortholog_one2one 2 retrogenes
retro_amel_1088, retro_amel_297,
Canis familiaris ENSCAFG00000006498 ortholog_one2one 2 retrogenes
retro_cfam_1041, retro_cfam_992,
Equus caballus ENSECAG00000007794 ortholog_one2one 1 retrogene
retro_ecab_525,
Erinaceus europaeus ENSEEUG00000008412 ortholog_one2one 3 retrogenes
retro_eeur_542, retro_eeur_692, retro_eeur_709,
Echinops telfairi ENSETEG00000008886 ortholog_one2one 1 retrogene
retro_etel_2090,
Felis catus ENSFCAG00000015390 ortholog_one2one 1 retrogene
retro_fcat_1458,
Loxodonta africana ENSLAFG00000029330 ortholog_one2one 1 retrogene
retro_lafr_750,
Macropus eugenii ENSMEUG00000008216 ortholog_one2one 2 retrogenes
retro_meug_1645, retro_meug_992,
Myotis lucifugus ENSMLUG00000024459 ortholog_one2many 1 retrogene
retro_mluc_1960,
Macaca mulatta ENSMMUG00000007743 ortholog_one2one 1 retrogene
retro_mmul_1144,
Mus musculus ENSMUSG00000043866 ortholog_one2many 1 retrogene
retro_mmus_35,
Tursiops truncatus ENSTTRG00000004894 ortholog_one2one 1 retrogene
retro_ttru_1113,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_592 63.49 84.86
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Download FASTA sequences of all ENSDNOG00000000814 retrocopies