Parental gene: | RAD23B, ENSDNOG00000001174 |
| Aliases: | None |
| Description: | RAD23 homolog B (S. cerevisiae) [Source:HGNC Symbol;Acc:9813] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | scaffold_7164:33812..71779(+) |
>ENSDNOG00000001174
ATGCAGGTCACCCTGAAGACCCTCCAGCAGCAGACCTTCAAGATCGACATCGACCCCGAGGAGACGGTGAAAGCACTGAA
AGAGAAGATTGAATCTGAAAAGGGGAAAGATGCCTTTCCGGTAGCAGGCCAAAAATTAATTTATGCAGGCAAAATCCTTA
ATGATGATACTGCTCTCAAAGAATATAAAATTGATGAGAAAAACTTTGTGGTGGTTATGGTGACAAAGCCCAAAGCGGTG
ACTGCACCAGCACCAGCTACAACTCAGCAGTCAAATCCAGCCACCACTGTTGCAGTTACTTCCACAACAGCAACCGTGGC
TCAGGCCCCAACCCCTGCCCCAGTTTTGGCTCCCACCTCTACGCCTACACCCATCACTCCAGCATCAACGACAGCATCTT
CTGAACCTGCACCTGCTAGTGCAACTAAACAAGAGAAACCTGCAGAAAAGCCAACAGAAACACCAGTGGCTACTAGCCCA
ACATCAACTGACAGCACATCAGGAGATTCTTCTCGGTCAAATCTTTTTGAAGATGCAACAAGTGCACTTGTGACTGGTCA
GTCTTACGAGAATATGGTGACTGAGATCATGTCTATGGGCTACGAACGAGAGCAAGTAATTGCAGCCCTGAGAGCCAGTT
TCAACAACCCTGACAGAGCAGTGGAGTACCTTTTGATGGGAATCCCTGGAGATAGAGAAAGTCAGGCTGTGGTGGACCCC
CCTCAAGCAGCTAGTACTGGGGCTCCTCAGTCTTCAGCAGTGGCTGCAGCTGCAGCAACTACAACCGCAACAACTACAAC
AGCAAGTTCTGGAGGACATCCGCTTGAATTTTTACGAAATCAGCCTCAGTTCCAACAAATGAGACAAATCATTCAACAGA
ATCCTTCCCTGCTTCCAGCATTGCTACAACAGATAGGTCGAGAGAATCCTCAGTTACTGCAG
ATGCAGGTCACCCTGAAGACCCTCCAGCAGCAGACCTTCAAGATCGACATCGACCCCGAGGAGACGGTGAAAGCACTGAA
AGAGAAGATTGAATCTGAAAAGGGGAAAGATGCCTTTCCGGTAGCAGGCCAAAAATTAATTTATGCAGGCAAAATCCTTA
ATGATGATACTGCTCTCAAAGAATATAAAATTGATGAGAAAAACTTTGTGGTGGTTATGGTGACAAAGCCCAAAGCGGTG
ACTGCACCAGCACCAGCTACAACTCAGCAGTCAAATCCAGCCACCACTGTTGCAGTTACTTCCACAACAGCAACCGTGGC
TCAGGCCCCAACCCCTGCCCCAGTTTTGGCTCCCACCTCTACGCCTACACCCATCACTCCAGCATCAACGACAGCATCTT
CTGAACCTGCACCTGCTAGTGCAACTAAACAAGAGAAACCTGCAGAAAAGCCAACAGAAACACCAGTGGCTACTAGCCCA
ACATCAACTGACAGCACATCAGGAGATTCTTCTCGGTCAAATCTTTTTGAAGATGCAACAAGTGCACTTGTGACTGGTCA
GTCTTACGAGAATATGGTGACTGAGATCATGTCTATGGGCTACGAACGAGAGCAAGTAATTGCAGCCCTGAGAGCCAGTT
TCAACAACCCTGACAGAGCAGTGGAGTACCTTTTGATGGGAATCCCTGGAGATAGAGAAAGTCAGGCTGTGGTGGACCCC
CCTCAAGCAGCTAGTACTGGGGCTCCTCAGTCTTCAGCAGTGGCTGCAGCTGCAGCAACTACAACCGCAACAACTACAAC
AGCAAGTTCTGGAGGACATCCGCTTGAATTTTTACGAAATCAGCCTCAGTTCCAACAAATGAGACAAATCATTCAACAGA
ATCCTTCCCTGCTTCCAGCATTGCTACAACAGATAGGTCGAGAGAATCCTCAGTTACTGCAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 79 .93 RPM |
| SRP012922_cerebellum | 58 .42 RPM |
| SRP012922_heart | 21 .35 RPM |
| SRP012922_kidney | 22 .73 RPM |
| SRP012922_liver | 37 .00 RPM |
| SRP012922_lung | 38 .79 RPM |
| SRP012922_quadricep_muscle | 79 .79 RPM |
| SRP012922_spleen | 41 .89 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000001926 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000016908 | possible_ortholog | 2 retrogenes | |
| Equus caballus | ENSECAG00000021928 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000007533 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000007316 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000011925 | ortholog_one2many | 1 retrogene | |
| Sus scrofa | ENSSSCG00000005436 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000007597 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_989 | 80.49 | 51.27 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_1982 | 57.89 | 53.18 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000001174 retrocopies