Parental gene: | PRPS1L1, ENSDNOG00000002028 |
| Aliases: | None |
| Description: | phosphoribosyl pyrophosphate synthetase 1-like 1 [Source:HGNC Symbol;Acc:9463] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | scaffold_25856:3396..21943(+) |
>ENSDNOG00000002028
ATGCCGAATATCAAAATCTTCAGCGGTAGCTCCCACCAGGATTTATCCCAGAAAATTGCCGACCGCCTGGGCCTGGAGCT
AGGCAAGGTGGTGACTAAGAAATTCAGCAACCAGGAGACCTGTGTGGAAATTGGAGAGAGTGTACGTGGAGAGGATGTCT
ACATTGTTCAGAGTGGTTGTAGTGAAATCAACGACAATCTCATGGAGCTTTTGATTATGATTAATGCCTGCAAGATCGCT
TCAGCCAGCCGGGTTACTGCAGTCATCCCATGCTTCCCTTATGCCCGGCAGGATAAGAAGGATAAGAGCCGGGCCCCAAT
CTCGGCCAAGCTTGTCGCAAATATGCTGTCTGTAGCAGGCGCAGATCATATCATCACCATGGACCTACACGCTTCTCAAA
TTCAGGGCTTTTTTGATATCCCAGTGGACAATTTGTATGCAGAGCCAGCTGTCCTGAAATGGATAAAGGAGAATATCTCT
GAAAGAAACTGCACTATTGTCTCACCAGATGCTGGTGGAGCTAAGAGAGTGACCTCCATTGCAGACCGATTGAATGTGGA
CTTTGCCTTGATTCACAAAGAACGGAAGAAGGCCAATGAAGTGGACCGCATGGTGCTGGTGGGAGATGTGAAGGATCGAG
TGGCTATCCTTGTGGATGACATGGCTGACACTTGCGGCACAATCTGTCATGCAGCTGACAAACTTTTGTCAGCTGGAGCC
ACCAGAGTTTATGCTATCTTGACGCATGGAATCTTTTCTGGCCCAGCCATTTCTCGAATCAACAATGCATGTTTTGAAGC
AGTAGTAGTCACCAATACCATACCTCAGGAGGATAAGATGAAGCATTGTTCCAAAATCCAGGTGATTGATATCTCCATGA
TCCTTGCAGAAGCCATCAGGAGAACTCACAATGGGGAATCTGTTTCCTACCTATTCAGCCATGTCCCTTTATAA
ATGCCGAATATCAAAATCTTCAGCGGTAGCTCCCACCAGGATTTATCCCAGAAAATTGCCGACCGCCTGGGCCTGGAGCT
AGGCAAGGTGGTGACTAAGAAATTCAGCAACCAGGAGACCTGTGTGGAAATTGGAGAGAGTGTACGTGGAGAGGATGTCT
ACATTGTTCAGAGTGGTTGTAGTGAAATCAACGACAATCTCATGGAGCTTTTGATTATGATTAATGCCTGCAAGATCGCT
TCAGCCAGCCGGGTTACTGCAGTCATCCCATGCTTCCCTTATGCCCGGCAGGATAAGAAGGATAAGAGCCGGGCCCCAAT
CTCGGCCAAGCTTGTCGCAAATATGCTGTCTGTAGCAGGCGCAGATCATATCATCACCATGGACCTACACGCTTCTCAAA
TTCAGGGCTTTTTTGATATCCCAGTGGACAATTTGTATGCAGAGCCAGCTGTCCTGAAATGGATAAAGGAGAATATCTCT
GAAAGAAACTGCACTATTGTCTCACCAGATGCTGGTGGAGCTAAGAGAGTGACCTCCATTGCAGACCGATTGAATGTGGA
CTTTGCCTTGATTCACAAAGAACGGAAGAAGGCCAATGAAGTGGACCGCATGGTGCTGGTGGGAGATGTGAAGGATCGAG
TGGCTATCCTTGTGGATGACATGGCTGACACTTGCGGCACAATCTGTCATGCAGCTGACAAACTTTTGTCAGCTGGAGCC
ACCAGAGTTTATGCTATCTTGACGCATGGAATCTTTTCTGGCCCAGCCATTTCTCGAATCAACAATGCATGTTTTGAAGC
AGTAGTAGTCACCAATACCATACCTCAGGAGGATAAGATGAAGCATTGTTCCAAAATCCAGGTGATTGATATCTCCATGA
TCCTTGCAGAAGCCATCAGGAGAACTCACAATGGGGAATCTGTTTCCTACCTATTCAGCCATGTCCCTTTATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 15 .56 RPM |
| SRP012922_cerebellum | 38 .08 RPM |
| SRP012922_heart | 10 .91 RPM |
| SRP012922_kidney | 15 .88 RPM |
| SRP012922_liver | 17 .18 RPM |
| SRP012922_lung | 30 .85 RPM |
| SRP012922_quadricep_muscle | 27 .00 RPM |
| SRP012922_spleen | 37 .31 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dasypus novemcinctus | ENSDNOG00000003550 | within_species_paralog | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000014534 | ortholog_one2one | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000014736 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000010071 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000012391 | ortholog_one2one | 3 retrogenes | |
| Ochotona princeps | ENSOPRG00000013140 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_947 | 81.22 | 61.51 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_2677 | 76.73 | 84.86 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000002028 retrocopies