Parental gene:

PSMC5, ENSDNOG00000002393

Aliases:None
Description:proteasome (prosome, macropain) 26S subunit, ATPase, 5 [Source:HGNC Symbol;Acc:9552]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_1670:52247..56435(+)


>ENSDNOG00000002393
ATGGCGCTTGACGGACCAGAGCAGATGGAGTTGGAAGAGGGGAAGGCAGGCAGTGGTCTCCGCCAGTATTACCTATCCAA
GATTGAAGAACTTCAGCTGATTGTGAATGACAAGAGTCAGAACCTTCGGCGGCTGCAAGCACAGAGAAATGAGCTAAATG
CAAAAGTTCGTCTGTTGCGGGAGGAGCTCCAGCTGCTGCAGGAACAGGGCTCCTATGTGGGGGAAGTTGTCCGGGCTATG
GATAAGAAGAAAGTGTTGGTTAAGGTACATCCCGAGGGCAAGTTTGTTGTAGATGTGGATAAGAACATAGACATCAATGA
TGTGACACCCAATTGCCGGGTGGCTCTAAGAAATGACAGTTATACTTTACACAAGATCCTGCCCAACAAGGTGGACCCTC
TGGTGTCATTGATGATGGTGGAGAAGGTACCAGACTCAACTTATGAGATGATTGGTGGACTGGACAAGCAGATTAAGGAG
ATCAAGGAAGTGATCGAGCTGCCTGTTAAACATCCCGAGCTCTTTGAGGCACTGGGCATTGCACAACCCAAGGGAGTGTT
GCTGTATGGACCCCCAGGCACTGGGAAGACACTATTGGCTCGGGCTGTAGCTCATCATACCGATTGCACCTTTATCCGTG
TCTCTGGCTCTGAACTGGTACAGAAATTCATTGGGGAAGGGGCAAGAATGGTGAGGGAGCTCTTTGTAATGGCTCGAGAA
CATGCTCCGTCCATCATCTTTATGGATGAAATTGACTCCATTGGCTCCTCACGGCTAGAAGGGGGTTCTGGGGGGGACAG
TGAAGTACAGCGCACAATGCTGGAGCTGCTCAACCAGCTGGATGGCTTTGAGGCCACCAAGAATATCAAGGTCATCATGG
CTACTAATAGGATTGATATCCTAGACTCAGCGCTGCTTCGCCCAGGGCGCATCGACAGAAAAATTGAATTCCCACCCCCC
AATGAGGAGGCCCGGCTGGACATCTTGAAGATTCATTCTCGAAAAATGAACCTAACACGAGGGATCAACCTGAGAAAAAT
TGCTGAGCTCATGCCAGGAGCATCAGGGGCTGAAGTGAAGGGTGTGTGTACAGAAGCTGGCATGTATGCCCTGCGGGAAC
GGCGAGTCCATGTCACCCAGGAGGACTTTGAGATGGCAGTAGCCAAGGTCATGCAGAAGGATAGTGAGAAAAACATGTCT
ATAAAGAAACTCTGGAAGTGA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 84 .98 RPM
SRP012922_cerebellum 182 .97 RPM
SRP012922_heart 89 .10 RPM
SRP012922_kidney 115 .82 RPM
SRP012922_liver 63 .01 RPM
SRP012922_lung 114 .85 RPM
SRP012922_quadricep_muscle 86 .37 RPM
SRP012922_spleen 100 .38 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000087191 ortholog_one2one 1 retrogene
retro_hsap_1949,
Gorilla gorilla ENSGGOG00000006803 ortholog_one2one 1 retrogene
retro_ggor_1418,
Macaca mulatta ENSMMUG00000016769 ortholog_one2one 1 retrogene
retro_mmul_1354,
Monodelphis domestica ENSMODG00000009873 ortholog_one2one 2 retrogenes
retro_mdom_1411, retro_mdom_1583,
Nomascus leucogenys ENSNLEG00000004150 ortholog_one2one 1 retrogene
retro_nleu_1480,
Oryctolagus cuniculus ENSOCUG00000004329 ortholog_one2many 1 retrogene
retro_ocun_78,
Otolemur garnettii ENSOGAG00000008296 ortholog_one2one 1 retrogene
retro_ogar_911,
Procavia capensis ENSPCAG00000002653 ortholog_one2one 1 retrogene
retro_pcap_352,
Pongo abelii ENSPPYG00000008533 ortholog_one2many 1 retrogene
retro_pabe_1606,
Pan troglodytes ENSPTRG00000009525 ortholog_one2one 1 retrogene
retro_ptro_1303,
Ictidomys tridecemlineatus ENSSTOG00000008945 ortholog_one2one 1 retrogene
retro_itri_1046,
Tupaia belangeri ENSTBEG00000010546 ortholog_one2one 3 retrogenes
retro_tbel_1411, retro_tbel_2422, retro_tbel_3450,
Tursiops truncatus ENSTTRG00000006984 ortholog_one2one 1 retrogene
retro_ttru_1532,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_1508 87.10 51.72
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Download FASTA sequences of all ENSDNOG00000002393 retrocopies