Parental gene:

FKBP5, ENSDNOG00000004678

Aliases:None
Description:FK506 binding protein 5 [Source:HGNC Symbol;Acc:3721]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_1008:26197..115681(-)


>ENSDNOG00000004678
ATGACTACTGACGAAGGAGCTAAGAACAATGGAAGGCTCACAGCAGCTGTTGCTGAACGAGGAGAGGATATTACCTCCAA
AAAAGACAGAGGAGTCTTAAAGATTGTCAAAAGAGTGGGGAAGAGCAAGGAAACACCAATGATTGGAGACAAAGTTTATG
TCCATTACAAAGGAAAATTGGCAAGTGGAAAGAAGTTTGATTCCAGTCATGACAGAAAACAACCATTTGTCTTTAATCTT
GGCAGAGGCCAAGTTATCAAGGCATGGGACATTGGAGTGGCTACCATGCAGAAAGGAGAGGTCTGCCATTTACTGTGTAA
GCCAGAGTATGGATATGGCTCGGCTGGCAGTGTCCCCAAAATTCCCTCGAATGCAACACTCTTTTTTGAGNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNTCCACCTGGAAGGGCATCAAGGTGGAAGGAAGTTTGATTGCAGAGATGTGGTGTT
CATTGTTGGCGAAGGAGAAGACCACGACATTCCGATTGGAATTGACAAAGCCCTGGAGAGGATGCAGCGGGAAGAGCACT
GTATTTTACATCTTGGACCACGATATGGTTTTGGAGAGGCAGGGAAGCCTAAATTTGGCATTGAGCCTAATGCTGCACTT
ACATATGAAGTTACACTTAAGAGCTTCGAAAAGGCCAAAGAGTCCTGGGAGATGGATACCAAAGAAAAATTGGAGCGGGC
TGCCATTGTCAAAGAGAAGGGAACCGTATACTTCAAGGGAGGCAAGTATGTGCAGGCAATGATTCAGTATGGGAAGATAG
TGTCCTGGTTAGAGCTGGAATATGGTTTATCAGAAAAAGAATCTAAAGCTTCCGATTCGTTTCTGCTTGCTGCCTATCTG
AACCTGGCCATGTGCTACCTGAAGGTTAGAGAATACATCAAAGCTGTCGAGTGCTGCGATAAGACCCTTGGACTGGACAG
TGCCAATGAGAAGGGCTTGTACAGAAGGGGTGAGGCCCGCCTGCTGATGAACGAGTTTGAGGCAGCCAAAGGTGACTTTG
AGAAAGTGTTGGAAGTGAATCCCCAGAATAAGGCCGCAAGACTGCAGATCTCCGTGTGCCAGAAAAAGGCCAAGGAGCAC
AATGAGCGGGACCGCAAGACTTATGCCAACATGTTCAAGAAGTTCGCAGAGCAGGATGCAAAGCAAGAGGCCAGTAAAAC
AATGGGCAAGAACACTTTAGAAGAGGTCACCAATGAAAAAGAGGCAGAAAGTCAAGCAATGGAAGAAGAGAAACCAGAAG
GTCATGTATGA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 41 .42 RPM
SRP012922_cerebellum 22 .96 RPM
SRP012922_heart 56 .15 RPM
SRP012922_kidney 60 .78 RPM
SRP012922_liver 41 .02 RPM
SRP012922_lung 120 .04 RPM
SRP012922_quadricep_muscle 116 .14 RPM
SRP012922_spleen 76 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000005868 within_species_paralog 16 retrogenes
retro_dnov_1289, retro_dnov_1577, retro_dnov_1666, retro_dnov_2236, retro_dnov_228, retro_dnov_2404, retro_dnov_2418, retro_dnov_2544, retro_dnov_2589, retro_dnov_263, retro_dnov_584, retro_dnov_621, retro_dnov_670, retro_dnov_684, retro_dnov_707, retro_dnov_937,
Dasypus novemcinctus ENSDNOG00000011244 within_species_paralog 1 retrogene
retro_dnov_894,
Echinops telfairi ENSETEG00000018432 ortholog_one2one 1 retrogene
retro_etel_867,
Homo sapiens ENSG00000096060 ortholog_one2one 4 retrogenes
retro_hsap_4255, retro_hsap_4260, retro_hsap_4262, retro_hsap_4318,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_1280 68.42 57.46
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Download FASTA sequences of all ENSDNOG00000004678 retrocopies