Parental gene:

ELL2, ENSDNOG00000005103

Aliases:None
Description:elongation factor, RNA polymerase II, 2 [Source:HGNC Symbol;Acc:17064]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_2276:30681..146772(-)


>ENSDNOG00000005103
ATGGCGGCGGGGGGGGCGGCCGGCCTGCGGGAGGAGCAGCGCTACGGGCTGTCGTGCGGGCGGCTGGGGCAGGACCACAT
CACCGTACTGCATGTGAAGCTCACTGAGACGGCGATCCGGGCGCTCGAGACCTACCAGAGCCACAAGAATTTAATTCCTT
TCCGACCTTCAATTCAGTTCCAAGGGCTCCAAGGGCGTGTCAAAATTCCCAAATATGATCCCCCCAATGAAGTGCATAAC
TTTAACTTCTATTTGTCAAATGTGGGTAAAGACAACCCTCAAGGCAGCTTTGACTGCATCCAGCAAACATTCTCCAGCTC
TGGAGCCTCCCAGCTCAATTGCCTGGGATTTATACAAGATAAAATTACAGTTTGTGCAACAAACGACTCGTATCAGATGA
CACGAGAAAGAATGACCCAGGCAGAGGAGGAATCCCGCAACCGTAGCACAAAAGTTATCAAACCTGGTGGACCATATGTA
GGGAAAAGAGTGCAGATTCGGAAAGCACCTCAAGCTGTTTCAGATGCAGTGCCTGAGAGGAAAAGGTCAACTCCCATGAA
CCCTGCAAATACGATTCGAAAGACACACAGCAGCAGCAGTGTTTCTCAGCGGCCATATAGGGACAGAGTGATTCACTTAC
TGGCACTGAAGGCCTACAAGAAACCTGAGCTGCTTGCTCGATTGCAGAAAGATGGTGTCAATCAAAAAGACAAGAACTCC
CTCGGAGCAATTCTGCAACAGGTAGCCAATCTGAATCCTAAGGACCTCTCATATACCTTAAAGGATTATGTTTTTAAAGA
GCTTCAAAGAGACTGGCCTGGATATAGTGATATAGACAGACGGTCATTGGAATCAGTGCTCTCTAGAAAACTAAATCCAT
CTCAGAATACTGCTGGCACCAGCCGTTCAGAATCTCCCCTATGTTCTAGTAGAGACACTGCATCTTCTCCTTCTCAGAAA
CGGCTTTTGGATTCAGATTTCATTGATCCTTTAATGAATAAAAAAGCTCGAATATCTCACCTTACGAATAGAGTACCGCC
AACATTAAATGGTCATTTGAATCCCACCAGTGAAAAGTCTGCTGCAAGTCTCCCACTGCCCCCTGCAGCTGCTGCAATTC
CCACCCCTCCACCGCTGCCGTCAACCCACCTCCCTGTCTCAAATCCTCCTCAGACTGTAAATTCTAACTCCAATTCCCCT
AGCACTCCAGAAGGCCGGGGGACTCAAGACCTACCTGTTGACAGTTTTAGTCAAAATGGTAGTATCTATGAGGACCAGCA
AGACAAGTATACCTCTAGGACTTCTCTGGAAACCTTAGCCCCTGATTCAGTTCTACTGAAGTGTCCAAAGCCTATAGAAG
AAAACCATTCACTATCTCACAAAAAGTCCCAAAAGAAATCTAAACACAAGGAAAAGGACCAAATTAAAAAGCATGACATT
GAGACTGTTGAGGATAAGGAGGAGGACCTTAAAAGAGAAGAAGAAATTGCCAAGCTAAATAACTCTGGTCCAAATTCCAG
TGAAGGAGTTAAAGAGAGTTGTGCTGCCTCCACAGAGCCTTCTTCAACAATTGAACTCCCAGATTATTTGATAAAATATA
TTGGTTTTTTTTCTTATGAACAACTCCAGAATTACAAGGATGACTTCAGTGCTGAGTATGAGGAGTACAGGGCCTTACAT
GCGAGGATGGAGACTGGAGCTAGAAGATTTATCAAACTGGATGTGCAACTAAAGCACTTTTCTCTGGGCTCAAAAAAGTA
TCAGAATATTCATGAAGAAGCTTTACAAGAACAGAAGATCACGCAGTTTAGTCCCAGTTACCATGAGGAAAAATATAGAT
GTGAATATCTTCATAACAAGCTGGCTCACATCAAAAGACTAATAGGTGAATTTGACCAACAGCAAGCAGAGTCATGGCAC
TAG

Library Parental gene expression (RPM)
SRP012922_ascending_colon 23 .34 RPM
SRP012922_cerebellum 5 .36 RPM
SRP012922_heart 1 .62 RPM
SRP012922_kidney 12 .87 RPM
SRP012922_liver 26 .78 RPM
SRP012922_lung 9 .32 RPM
SRP012922_quadricep_muscle 4 .33 RPM
SRP012922_spleen 28 .73 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000010607 ortholog_one2one 1 retrogene
retro_amel_651,
Equus caballus ENSECAG00000022933 ortholog_one2one 1 retrogene
retro_ecab_1092,
Homo sapiens ENSG00000118985 ortholog_one2one 1 retrogene
retro_hsap_459,
Nomascus leucogenys ENSNLEG00000014192 ortholog_one2many 1 retrogene
retro_nleu_881,
Pongo abelii ENSPPYG00000015647 ortholog_one2many 1 retrogene
retro_pabe_1757,
Pan troglodytes ENSPTRG00000017090 ortholog_one2one 1 retrogene
retro_ptro_346,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_1413 76.00 65.78
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Download FASTA sequences of all ENSDNOG00000005103 retrocopies