Parental gene:

ELL2, ENSECAG00000022933

Aliases:None
Description:elongation factor, RNA polymerase II, 2 [Source:HGNC Symbol;Acc:17064]
Organism:Horse (Equus caballus)
Coordinates:14:72787717..72841812(+)


>ENSECAG00000022933
CTTATCAAAATTCCCAAAAATGATCCCCCCAATGAAGTGCATACCTTTAACTTCTATTTGTCAAATGTGGGTAAAGACAA
CCCTCAGGGCAGCTTTGACTGCATCCAGCAAACATTCTCCAGCTCTGGAGCCTCCCAGCTCAATTGCCTGGGATTTATAC
AAGATAAAATTACAGTGTGTGCAACAAACGACTCGTATCAGATGACACGAGAAAGAATGACCCAGGCAGAGGAGGAATCT
CGCAACCGAAGCACAAAAGTTATCAAACCCGGTGGACCATATGTAGGGAAGAGAGTGCAAATTCGGAAAGCGCCTCAAGC
TGTTTCAGATGCAGTGCCTGAGAGGAAAAGGTCAACCCCTATGAACCCTGCAAATACGATTCGAAAGACACACGGCAGCA
GCAGTGTTTCTCAGCGGCCATATAGGGACAGAGTGATTCACTTGCTGGCACTGAAGGCCTACAAGAAACCTGAGCTGCTG
GCTCGACTGCAGAAAGATGGTGTCAATCAAAAAGACAAGAACTCCCTCGGAGCAATTCTGCAGCAGGTAGCCAATCTGAA
TCCTAAAGACCTCTCGTATACCTTAAAGGATTATGTTTTTAAAGAGCTTCAAAGAGACTGGCCTGGATACAATGAAATAG
ACAGACGGTCATTAGAGTCAGTGCTCTCTAGAAAACTAAATCCATCTCAGAATGCTGCCAGCACCAGCCGTTCAGAATCT
CCAGTATGTTCTAGTAGAGACACTGCATCTTCTCCTCAGAAACGGCTTTTAGATTCAGACTTCATTGATCCTTTAATGAA
TAAAAAAGCTCGAATATCTCACCTAACAAACAGAGTGCCACCAACATTAAATGGTCATTTGAATCCCACCAGTGAAAAGT
CGGCCACAGGCCTCCCGCCGCCCCCTGCAGCTGCCGCCATCTCCACCCCTCCACCGCCACCTTCAGCCCACCTGCCCGTC
TCCAATCCTCCTCAGACTGTAAACTCGAACTCCAATTCCCCTAGCACTCCAGAAGGCCGGGGGACTCAAGACCTACCCGT
TGACAGTTTTAGTCAAAACGGTAGTGTCTATGAGGACCAGCAAGACAAATATACCTCTAGGACTTCTCTGGAAACCTTAC
CCCCTGGTTCAGTTCTACTAAAGTGTCCAAAGCCTATGGAAGAAAACCATTCAATGTCTCACAAAAAGTCCAAAAAGAAG
TCTAAAAAACACAGGGAAAAGGACCAAATAAAAAAGCACGACATTGAGATGATTGAGGAAAAAGAAGAGGACCTTAAAAG
AGAAGAGGAAATTGCCAAGCTGAATGACTCCAGTCCGGATTCCAATGAAGGAGTTAAAGAGGGTTGCACTGCCTCCACGG
AGCCTTCTTCAACAATTGAACTCCCAGATTATTTGATTAAATATATTGCTATCGTCTCCTATGAGCAACGCCAGAATTAC
AAGGATGACTTCAATGCGGAGTACGATGAGTACAGAGCCTTGCATGCCAGAATGGAGACTGTAGCTAGAAGATTTATCAA
ACTGGATGCGCAACGAAAGCGCCTTTCTCCAGGCTCGAAAGAGTATCAGAATGTTCATGAAGAAGTCTTACAAGAATATC
AGAAGATCAAGCAGTCTAGTCCCAATTACCATGAAGAAAAATACAGATGCGAGTATCTTCATAACAAGCTGGCTCACATC
AAAAGACTAATAGGTGAATTTGACCAACAGCAAGCAGAGTCATGGCACTAG

Library Parental gene expression (RPM)
SRP021940_synovial_membrane 12 .88 RPM
SRP021940_embryo 4 .19 RPM
SRP021940_cerebellum 6 .18 RPM
SRP021940_testis 17 .39 RPM
SRP021940_placental_villous 13 .18 RPM
SRP021940_articular_cartilage 35 .48 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000010607 ortholog_one2one 1 retrogene
retro_amel_651,
Dasypus novemcinctus ENSDNOG00000005103 ortholog_one2one 1 retrogene
retro_dnov_1413,
Homo sapiens ENSG00000118985 ortholog_one2one 1 retrogene
retro_hsap_459,
Nomascus leucogenys ENSNLEG00000014192 ortholog_one2many 1 retrogene
retro_nleu_881,
Pongo abelii ENSPPYG00000015647 ortholog_one2many 1 retrogene
retro_pabe_1757,
Pan troglodytes ENSPTRG00000017090 ortholog_one2one 1 retrogene
retro_ptro_346,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_1092 53.54 78.47
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Download FASTA sequences of all ENSECAG00000022933 retrocopies