Parental gene:

UBE2E2, ENSDNOG00000005448

Aliases:None
Description:ubiquitin-conjugating enzyme E2E 2 [Source:HGNC Symbol;Acc:12478]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_6275:35998..131460(+)


>ENSDNOG00000005448
ATCCAAAAGGAACTTGCAGAGATTACATTGGACCCTCCTCCCAACTGTAGTGCTGGACCCAAAGGAGACAACATTTATGA
ATGGAGGTCAACTATTTTGGGACCCCCAGGATCAGTCTATGAAGGAGGAGTGTTCTTTCTTGACATTACTTTTTCACCAG
ACTATCCATTTAAACCCCCTAAGGTTACCTTCCGAACAAGAATCTATCACTGTAATATTAACAGTCAAGGCGTGATCTGT
CTGGACATCCTGAAGGACAACTGGAGTCCAGCCCTAACCATTTCTAAAGTTCTCCTCTCCATCTGCTCCCTTCTCACAGA
TTGCAATCCTGCCGACCCTCTGGTGGGCAGCATTGCCACACAGTACATGACCAACAGAGCGGAGCATGACCGGATGGCCA
GACAGTGGACTAAGCGGTACGCCACATAG

Library Parental gene expression (RPM)
SRP012922_ascending_colon 6 .81 RPM
SRP012922_cerebellum 13 .33 RPM
SRP012922_heart 5 .10 RPM
SRP012922_kidney 6 .84 RPM
SRP012922_liver 1 .24 RPM
SRP012922_lung 10 .23 RPM
SRP012922_quadricep_muscle 3 .98 RPM
SRP012922_spleen 11 .56 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000010341 ortholog_one2one 2 retrogenes
retro_chof_1304, retro_chof_674,
Ciona intestinalis ENSCING00000006860 ortholog_one2one 1 retrogene
retro_cint_33,
Dasypus novemcinctus ENSDNOG00000009320 other_paralog 30 retrogenes
retro_dnov_1061, retro_dnov_1125, retro_dnov_113, retro_dnov_114, retro_dnov_1167, retro_dnov_1193, retro_dnov_1198, retro_dnov_1257, retro_dnov_141, retro_dnov_1544, retro_dnov_1752, retro_dnov_1761, retro_dnov_1831, retro_dnov_1862, retro_dnov_1912, retro_dnov_1934, retro_dnov_1995, retro_dnov_2084, retro_dnov_2135, retro_dnov_2289, retro_dnov_2362, retro_dnov_2457, retro_dnov_2622, retro_dnov_436, retro_dnov_574, retro_dnov_750, retro_dnov_795, retro_dnov_83, retro_dnov_889, retro_dnov_917,
Dasypus novemcinctus ENSDNOG00000013821 other_paralog 1 retrogene
retro_dnov_537,
Felis catus ENSFCAG00000007748 ortholog_one2one 2 retrogenes
retro_fcat_1582, retro_fcat_913,
Microcebus murinus ENSMICG00000016799 ortholog_one2one 3 retrogenes
retro_mmur_1075, retro_mmur_15, retro_mmur_419,
Myotis lucifugus ENSMLUG00000025144 ortholog_one2one 1 retrogene
retro_mluc_712,
Ochotona princeps ENSOPRG00000010615 ortholog_one2one 2 retrogenes
retro_opri_329, retro_opri_788,
Tursiops truncatus ENSTTRG00000005156 ortholog_one2one 1 retrogene
retro_ttru_1075,
Vicugna pacos ENSVPAG00000007007 ortholog_one2one 3 retrogenes
retro_vpac_108, retro_vpac_315, retro_vpac_425,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_156 91.55 100.00
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2. retro_dnov_424 80.83 83.80
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3. retro_dnov_1217 75.68 76.06
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4. retro_dnov_1281 75.00 64.08
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5. retro_dnov_1360 97.89 100.00
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6. retro_dnov_2026 78.32 100.00
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7. retro_dnov_2508 81.94 100.00
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Download FASTA sequences of all ENSDNOG00000005448 retrocopies