Parental gene:

UBE2E2, ENSCHOG00000010341

Aliases:None
Description:ubiquitin-conjugating enzyme E2E 2 [Source:HGNC Symbol;Acc:12478]
Organism:Sloth (Choloepus hoffmanni)
Coordinates:GeneScaffold_6907:1161..64980(+)


>ENSCHOG00000010341
CTGTCCACTGAGGCACAAAGAGTTGATGTCAGTCCAAGCACTAGCGGAGGAAGTTCCGATGGAGACCAACGTGAAAGTGT
TCAGCTAGAACCAGAAAGAGAGCAAGTTCAACCTAAGAAAAAAGAGGGAAAAATATCTAGCAAAACAGCTGCTAAATTGT
CAACTAGTGCTAAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCTGGACCCAAA
GGAGACAACATTTATGAATGGAGGTCAACTATTTTGGGACCCCCAGGATCTGTGTATGAAGGAGGAGTATTCTTTCTTGA
CATTACCTTTTCACCAGACTATCCATTTAAACCCCCTAAGGTTACCTTCCGAACAAGAATCTATCACTGTAATATTAACA
GCCAAGGTGTGATCTGTCTGGACATCCTAAAGGACAACTGGAGTCCAGCCCTAACCATTTCTAAAGTTCTCCTCTCCATC
TGCTCACTTCTTACAGATTGCAACCCTGCGGACCCTCTGGTAGGCAGCATTGCCACGCAGTACATGACCAACAGAGCGGA
GCACGACCGGATGGCCAGACAGTGGACTAAGCGGTACGCCACATAG

Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000001213 other_paralog 21 retrogenes
retro_chof_1091, retro_chof_1169, retro_chof_1465, retro_chof_1675, retro_chof_1731, retro_chof_2071, retro_chof_2089, retro_chof_2098, retro_chof_2101, retro_chof_2190, retro_chof_2266, retro_chof_2364, retro_chof_2481, retro_chof_2485, retro_chof_2514, retro_chof_2637, retro_chof_619, retro_chof_662, retro_chof_683, retro_chof_728, retro_chof_920,
Choloepus hoffmanni ENSCHOG00000001515 other_paralog 1 retrogene
retro_chof_1084,
Choloepus hoffmanni ENSCHOG00000004649 other_paralog 2 retrogenes
retro_chof_2549, retro_chof_439,
Choloepus hoffmanni ENSCHOG00000007325 within_species_paralog 3 retrogenes
retro_chof_1756, retro_chof_2077, retro_chof_2358,
Ciona intestinalis ENSCING00000006860 ortholog_one2many 1 retrogene
retro_cint_33,
Dasypus novemcinctus ENSDNOG00000005448 ortholog_one2one 7 retrogenes
retro_dnov_1217, retro_dnov_1281, retro_dnov_1360, retro_dnov_156, retro_dnov_2026, retro_dnov_2508, retro_dnov_424,
Felis catus ENSFCAG00000007748 ortholog_one2one 2 retrogenes
retro_fcat_1582, retro_fcat_913,
Microcebus murinus ENSMICG00000016799 ortholog_one2one 3 retrogenes
retro_mmur_1075, retro_mmur_15, retro_mmur_419,
Myotis lucifugus ENSMLUG00000025144 ortholog_one2one 1 retrogene
retro_mluc_712,
Ochotona princeps ENSOPRG00000010615 ortholog_one2one 2 retrogenes
retro_opri_329, retro_opri_788,
Tursiops truncatus ENSTTRG00000005156 ortholog_one2one 1 retrogene
retro_ttru_1075,
Vicugna pacos ENSVPAG00000007007 ortholog_one2one 3 retrogenes
retro_vpac_108, retro_vpac_315, retro_vpac_425,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_chof_674 69.02 91.54
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2. retro_chof_1304 74.88 100.00
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Download FASTA sequences of all ENSCHOG00000010341 retrocopies