Parental gene: | SETD8, ENSDNOG00000010371 |
| Aliases: | None |
| Description: | SET domain containing (lysine methyltransferase) 8 [Source:HGNC Symbol;Acc:29489] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_1811:148656..164811(+) |
>ENSDNOG00000010371
GCTAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGAATGTATTTGCCGGGCAATCAAAGATCT
ATTCCTACATGAGCCCGAACAAATGCTCTGGAATGCGTTCCCCCCTTCAGGAAGAGAACTCAGTCGCACATCACGAAGTC
AAATGCCAGGGGAAACCAATAGCCGGAATCTACAGGAGGCGAGAAGAGAAGAGAAACACCGGAAACGCAGCACGGAGCAC
CATGAAGTCCGAGGAACAGAAGCTCAAAGACGCCAGGAGAGGTCCCCTGGCACCTTTTCCAAACCAAAAATCTGAAGCAG
CAGAACCTCCCAAAACTCCCACCTCGTCTTGCGATTCTGCCAATACAGCTGTGACCAAGCAAACTCTGAAAAAGCCTGGC
AAGGGCAAACAGGCCCCGCGGAAGAAAGGTCAAGGGAAAACGCAGCAGAATCGCAAACTCACAGATTTCTACCCTGTCCG
AAGGAGCTCCAGGAAGAGCAAAGCTGAGCTTCAGTCTGAAGAAAGGAAAAGAATAGACGAATTGATTGAAAGTGGGAAGG
AGGAAGGAATGAAGATTGACCTCATCGACGGCAAAGGCAGGGGAGTGATTGCCACCAAGCAGTTCTCCCGGGGCGAGTTT
GTGGTGGAGTACCACGGGGACCTCATCGAGATCACCGACGCCAAGAAGCGGGAGGCTCTGTATGCACAAGACCCCTCCAC
GGGCTGCTACATGTACTACTTTCAGTACCTGAGCAAGACCTACTGCGTGGATGCGACCAGAGAGACGAACCGCCTGGGGA
GGCTGATCAACCACAGCAAATGCGGCAACTGCCAGACCAAACTGCACGACATCGGTGGCGTGCCTCACCTCATCCTCATC
GCAGCCCGCGACATCAAGGCCGGGGAGGAGCTCCTGTATGACTACGGGGACCGCAGCAAGGCTTCCATCGAGGCCTACCC
GTGGCTGAAGCATTGA
GCTAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGAATGTATTTGCCGGGCAATCAAAGATCT
ATTCCTACATGAGCCCGAACAAATGCTCTGGAATGCGTTCCCCCCTTCAGGAAGAGAACTCAGTCGCACATCACGAAGTC
AAATGCCAGGGGAAACCAATAGCCGGAATCTACAGGAGGCGAGAAGAGAAGAGAAACACCGGAAACGCAGCACGGAGCAC
CATGAAGTCCGAGGAACAGAAGCTCAAAGACGCCAGGAGAGGTCCCCTGGCACCTTTTCCAAACCAAAAATCTGAAGCAG
CAGAACCTCCCAAAACTCCCACCTCGTCTTGCGATTCTGCCAATACAGCTGTGACCAAGCAAACTCTGAAAAAGCCTGGC
AAGGGCAAACAGGCCCCGCGGAAGAAAGGTCAAGGGAAAACGCAGCAGAATCGCAAACTCACAGATTTCTACCCTGTCCG
AAGGAGCTCCAGGAAGAGCAAAGCTGAGCTTCAGTCTGAAGAAAGGAAAAGAATAGACGAATTGATTGAAAGTGGGAAGG
AGGAAGGAATGAAGATTGACCTCATCGACGGCAAAGGCAGGGGAGTGATTGCCACCAAGCAGTTCTCCCGGGGCGAGTTT
GTGGTGGAGTACCACGGGGACCTCATCGAGATCACCGACGCCAAGAAGCGGGAGGCTCTGTATGCACAAGACCCCTCCAC
GGGCTGCTACATGTACTACTTTCAGTACCTGAGCAAGACCTACTGCGTGGATGCGACCAGAGAGACGAACCGCCTGGGGA
GGCTGATCAACCACAGCAAATGCGGCAACTGCCAGACCAAACTGCACGACATCGGTGGCGTGCCTCACCTCATCCTCATC
GCAGCCCGCGACATCAAGGCCGGGGAGGAGCTCCTGTATGACTACGGGGACCGCAGCAAGGCTTCCATCGAGGCCTACCC
GTGGCTGAAGCATTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 91 .21 RPM |
| SRP012922_cerebellum | 25 .84 RPM |
| SRP012922_heart | 20 .88 RPM |
| SRP012922_kidney | 24 .64 RPM |
| SRP012922_liver | 20 .28 RPM |
| SRP012922_lung | 74 .53 RPM |
| SRP012922_quadricep_muscle | 30 .29 RPM |
| SRP012922_spleen | 89 .51 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Rattus norvegicus | ENSRNOG00000001062 | possible_ortholog | 4 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000015376 | ortholog_one2many | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_258 | 61.29 | 69.80 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000010371 retrocopies