Parental gene: | ARPC5, ENSDNOG00000010375 |
| Aliases: | None |
| Description: | actin related protein 2/3 complex, subunit 5, 16kDa [Source:HGNC Symbol;Acc:708] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_2153:225225..238533(-) |
>ENSDNOG00000010375
ATGTCGAAGAACACGGTGTCGTCAGCCCGGTTCCGGAAGGTGGACGTGGATGAGTACGACGAGAACAAGTTCGTGGACGA
GGAAGACGGAGGCGATGGCCAGGCGGGGCCCGACGAGGGCGAGGTGGACTCCTGCCTGCGGCACTCTGTCACAGGAAACA
TGACAGCTGCTCTACAAGCAGCTCTGAAAAATCCCCCTATCAACACCAAGAGTCAAGCAGTAAAGGATCGGGCAGGCAGC
ATTGTGTTGAAGGTGCTCATCTCTTTTAAAGCTAATGATATTGAAAAGGCAGTTCAATCTCTGGACAAGAATGGTGTGGA
TCTCTTAATGAAGTATATTTATAAAGGCTTTGAGAGCCCCTCTGACAATAGTAGTGCTGTGTTATTGCAATGGCACGAAA
AG
ATGTCGAAGAACACGGTGTCGTCAGCCCGGTTCCGGAAGGTGGACGTGGATGAGTACGACGAGAACAAGTTCGTGGACGA
GGAAGACGGAGGCGATGGCCAGGCGGGGCCCGACGAGGGCGAGGTGGACTCCTGCCTGCGGCACTCTGTCACAGGAAACA
TGACAGCTGCTCTACAAGCAGCTCTGAAAAATCCCCCTATCAACACCAAGAGTCAAGCAGTAAAGGATCGGGCAGGCAGC
ATTGTGTTGAAGGTGCTCATCTCTTTTAAAGCTAATGATATTGAAAAGGCAGTTCAATCTCTGGACAAGAATGGTGTGGA
TCTCTTAATGAAGTATATTTATAAAGGCTTTGAGAGCCCCTCTGACAATAGTAGTGCTGTGTTATTGCAATGGCACGAAA
AG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 102 .87 RPM |
| SRP012922_cerebellum | 25 .71 RPM |
| SRP012922_heart | 10 .91 RPM |
| SRP012922_kidney | 21 .36 RPM |
| SRP012922_liver | 40 .25 RPM |
| SRP012922_lung | 71 .63 RPM |
| SRP012922_quadricep_muscle | 6 .23 RPM |
| SRP012922_spleen | 121 .44 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000000560 | ortholog_one2one | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000014969 | possible_ortholog | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000007194 | possible_ortholog | 1 retrogene | |
| Mus musculus | ENSMUSG00000008475 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000028062 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_199 | 77.78 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_1277 | 54.22 | 61.94 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_dnov_2495 | 67.27 | 81.34 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000010375 retrocopies