Parental gene: | MOSPD1, ENSDNOG00000013117 |
| Aliases: | None |
| Description: | motile sperm domain containing 1 [Source:HGNC Symbol;Acc:25235] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | scaffold_5207:43142..54935(-) |
>ENSDNOG00000013117
ATGCATCAACAAAAAAGACAACCAGAGTTAGTGGAAGGAAATCTTCCTGTTTTTGTGTTTCCCACGGAGCTAATATTTTA
TGCAGATGATCAGTCAACACATAAGCAAGTGTTGACCCTGTATAATCCCTATGAGTTTGTCTTAAAGTTCAAAGTTTTGT
GTACTACTCCAAATAAGTATGTTGTCGTTGATGCTGCAGGTGCAGTAAAGCCTCAGTGTTGTGTGGATATTGTGATTCGT
CATAGAGACGTTCGATCCTGTCACTATGGTGTAATAGACAAATTCCGCCTCCAAGTTTCCGAGCAAAGCCAGAGGAAGGC
TTTAGGACGGAAAGAAGTTGTCGCTACTCTTCTTCCATCTGCAAAAGAACAGCAAAAGGAAGAAGAGGGAAAAAGGATAA
AGGAACATTTAACAGAGAGTTTATTTTTTGAGCAGTCGTTTCAACCAGGTAAAAACAGAACTGTCTCCTCAGGGCCTAGT
TTACTAACTGTCTTCCTGGGAGTGGTGTGCATTGCAGCCCTAATGCTTCCTACGCTGGGGGATGTGGAATCGCTGGTACC
TCTCTACCTCCACTTAAGTGTGAATCAAAAATTAGTGGCCGCTTATATTTTAGGTCTTATCACAATGGCTCTACTTAGAA
CATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 4 .28 RPM |
| SRP012922_cerebellum | 4 .81 RPM |
| SRP012922_heart | 11 .14 RPM |
| SRP012922_kidney | 2 .19 RPM |
| SRP012922_liver | 7 .28 RPM |
| SRP012922_lung | 3 .51 RPM |
| SRP012922_quadricep_muscle | 9 .17 RPM |
| SRP012922_spleen | 2 .40 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000001304 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000007386 | ortholog_one2one | 5 retrogenes | |
| Macaca mulatta | ENSMMUG00000022505 | ortholog_one2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000015178 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000023074 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000005739 | ortholog_one2one | 2 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000011544 | ortholog_one2many | 1 retrogene | |
| Sus scrofa | ENSSSCG00000012686 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000008152 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000006102 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_926 | 67.46 | 57.48 | Please wait, loading  |
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| 2. | retro_dnov_1825 | 73.45 | 51.87 | Please wait, loading |
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| 3. | retro_dnov_2650 | 71.76 | 60.75 | Please wait, loading |
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| 4. | retro_dnov_2660 | 72.52 | 60.75 | Please wait, loading |
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Download FASTA sequences of all ENSDNOG00000013117 retrocopies