Parental gene:

EIF2A, ENSDNOG00000014002

Aliases:None
Description:eukaryotic translation initiation factor 2A, 65kDa [Source:HGNC Symbol;Acc:3254]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_6832:253243..298730(+)


>ENSDNOG00000014002
GAGGAGACGTGTTGGGGCCGGGTTCGGCCCTCGAACTCTGACCCCAACGGTTTCCCTTTCGATAAGATGGCGCCGTCCAC
GCCGCTCCTGGCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNAGAATCTGAGAAAAATTGCAAAGTCTATACCTTCAGTAATGATGAGACCTTGTTTGCCGGCAACGGAGAAAAAGTA
AATATTATCAGTGTCACTAACAAGGGACTACTGCACTCCTTCGACCTCCCAAAGGCAGTTTGCCTTGAGTTCTCGCCAAA
AAACACTGTCCTGGCGGCGTGGCAGCCTTATGCTANNNNNNNNNNNNNCACAGCTGGGATTCCCAACCTACAGCTTTATG
ATGTGAAAACGGGGACGTGTTTGACATCTTTCATCCAGAAAAAAATGCAAAATTGGTGTCCATCCTGGTCAGAAGATGAA
ACTATTTGTGCCCGAAATGTTAACAATGAAGTTCACTTCTTTGAAAACAACAATATTAGCACAATTGCAAATAAGTTGCA
TTTGCAAAAGATTAATGATTTTGTGTTATCACCTGGACCCCAACCATACAAGGTGGCCGTCTATGTTCCAGGAAGTAAGG
GTGCACCTTCATTTGTTAGATTATATCAGTACCCTAACTTTGGTGGACCTCATGCAGCTTTAGCCAACAAAAGTTTCTTT
AAGGCTGATAAGGTTACAATGCTATGGAATAAAAAAGCTACTGCAGTGTTGGTAATAGCTAGTACAGATGTTGACAAGAC
AGGCGCTTCCTACTATGGGGAACAAACGCTGCACTACATTGCAACAAATGGAGAAAGTGCTGTAGTGCAATTACCAAAAA
ATGGTCCCATTTATGATGTAGTATGGAACTCTAGTTCCACTGAATTTTGTGCTGTTTATGGTTTTATGCCTGCCAAAGCA
ACAGTTTTCAACTTGAAATGTGATCCTGTGTTTGATTTTGGAACTGGTCCTCGAAATGCAGCCTTCTATAGCCCTCATGG
ACATATATTAGTACTAGCTGGATTTGGAAATCTGAGGGGACAAATGGAAGTATGGGATGTTAAAAACTACAAACTTATTT
CTAAACCAGTGGCCTCTGATTCTACATATTTTGCTTGGTGCCCAGATGGTGAGCATATTTTGACTGCCACGTGTGCTCCC
AGGTTACGTGTTAATAATGGGTACAAGATTTGGCATTATACTGGCTCTGTCTTGCACAAATATGATGTGCCGTCAAATGC
AGAAATTTGGCAGGTTTCTTGGCAGCCGTTTTTGGATGGAATATTTCCAGCAAAAAAAATAACTTACCAAGCAGTTCCAA
GTGAAGTACCTAGTGAGGAACCTAAAGTTACAACAGCTTATAGACCTCCAGCTTTAAGAAATAAACCAGTCACCAATTCC
AAACTGCATGAGGATCCACCCCAGAATATGCCACAGGGAAATGATAAGCCATTATCAAAAACAGCCCTTAAAAATCAAAG
GAAGCATGAAGCCAAGAAAGCTGCAAAGCAGGAAGCAAGAAGTGACAAGAGTCCAGATTTGGCACCTCCTGCCCCACAGA
GCACACCACAAAATATCATCTCTCAGTCAACCTCAGGAGACCCCGAGATAGACAAAAAAATCAAGAACCTAAAGAAGAAA
CTGAAAGCAATTGAACAACTGAAAGAACAAGCAGCAAGTGGAAAACAGTTAGAAAAAAATCAG

Library Parental gene expression (RPM)
SRP012922_ascending_colon 42 .78 RPM
SRP012922_cerebellum 30 .52 RPM
SRP012922_heart 23 .67 RPM
SRP012922_kidney 39 .15 RPM
SRP012922_liver 34 .52 RPM
SRP012922_lung 45 .36 RPM
SRP012922_quadricep_muscle 63 .87 RPM
SRP012922_spleen 50 .25 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000001199 ortholog_one2one 1 retrogene
retro_cjac_968,
Homo sapiens ENSG00000144895 ortholog_one2one 1 retrogene
retro_hsap_565,
Gorilla gorilla ENSGGOG00000015391 ortholog_one2one 1 retrogene
retro_ggor_509,
Loxodonta africana ENSLAFG00000003767 ortholog_one2one 1 retrogene
retro_lafr_502,
Macaca mulatta ENSMMUG00000017696 ortholog_one2one 1 retrogene
retro_mmul_2395,
Nomascus leucogenys ENSNLEG00000003219 ortholog_one2one 1 retrogene
retro_nleu_2213,
Oryctolagus cuniculus ENSOCUG00000016095 ortholog_one2many 3 retrogenes
retro_ocun_1771, retro_ocun_1825, retro_ocun_1861,
Pongo abelii ENSPPYG00000029636 ortholog_one2one 2 retrogenes
retro_pabe_517, retro_pabe_652,
Pan troglodytes ENSPTRG00000015528 ortholog_one2one 1 retrogene
retro_ptro_423,
Ictidomys tridecemlineatus ENSSTOG00000003374 ortholog_one2one 1 retrogene
retro_itri_1706,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_1148 90.19 53.70
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Download FASTA sequences of all ENSDNOG00000014002 retrocopies