Parental gene: | EIF2A, ENSPPYG00000029636 |
| Aliases: | None |
| Description: | eukaryotic translation initiation factor 2A, 65kDa [Source:HGNC Symbol;Acc:3254] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 3:153428879..153445343(+) |
>ENSPPYG00000029636
ATGCTGTGGAATAAAAAAGCTACTGCTGTGTTGGTAATAGCTAGCACAGATGTTGACAAGACAGGAGCTTCCTACTATGG
AGAACAAACTCTACACTACATTGCAACAAATGGAGAAAGTGCTGTAGTGCAATTACCAAAAAATGGCCCCATTTATGATG
TAGTTTGGAATTCTAGTTCTACTGAGTTTTGTGCTGTATATGGTTTTATGCCTGCCAAAGCGACAATTTTCAACTTGAAA
TGTGATCCTGTATTTGACTTTGGAACTGGTCCTCGTAATGCAGCCTACTATAGCCCTCATGGACATATATTAGTATTAGC
TGGATTTGGAAATCTGAGGGGACAAATGGAAGTGTGGGATGTGAAAAACTACAAACTTATTTCTAAACCGGTGGCTTCTG
ATTCTACATATTTTGCTTGGTGCCCGGATGGTGAGCATATTTTAACAGCTACATGTGCTCCCAGGTTACGGGTTAATAAT
GGATACAAAATTTGGCATTATACTGGCTCTATCTTGCACAAGTATGATGTGCCATCAAATGCAGAATTATGGCAGGTTTC
TTGGCAGCCATTTTTGGATGGAATATTTCCAGCAAAAACAATAACTTACCAAGCAGTTCCAAGTGAAGTACCCAATGAGG
AACCTAAAGTTGCAACAGCTTATAGACCCCCAGCTTTAAGAAATAAACCAATCACCAATTCCAAATTGCATGAAGAGGAG
CCACCTCAGAATATGAAACCACAATCGGGAAACGATAAGCCATTATCAAAAACAGCTCTTAAAAATCAAAGGAAGCATGA
AGCTAAGAAAGCTGCAAAGCAGGAAGCAAGAAGTGACAAGAGTCCAGATTTGGCACCTACTCCTGCCCCACAGAGCACAC
CACGAAACACTGTCTCTCAGCCAATTTCTGGGGACCCTGAGATAGACAAAAAAATCAAGAACCTAAAGAAGAAACTGAAA
GCAATCGAACAACTGAAAGAACAAGCAGCAACTGGAAAACAGCTAGAAAAAAATCAGTTGGAGAAAATTCAGAAAGAAAC
AGCCCTTCTCCAGGAGCTGGAAGATTTGGAATTGGGTATTTAA
ATGCTGTGGAATAAAAAAGCTACTGCTGTGTTGGTAATAGCTAGCACAGATGTTGACAAGACAGGAGCTTCCTACTATGG
AGAACAAACTCTACACTACATTGCAACAAATGGAGAAAGTGCTGTAGTGCAATTACCAAAAAATGGCCCCATTTATGATG
TAGTTTGGAATTCTAGTTCTACTGAGTTTTGTGCTGTATATGGTTTTATGCCTGCCAAAGCGACAATTTTCAACTTGAAA
TGTGATCCTGTATTTGACTTTGGAACTGGTCCTCGTAATGCAGCCTACTATAGCCCTCATGGACATATATTAGTATTAGC
TGGATTTGGAAATCTGAGGGGACAAATGGAAGTGTGGGATGTGAAAAACTACAAACTTATTTCTAAACCGGTGGCTTCTG
ATTCTACATATTTTGCTTGGTGCCCGGATGGTGAGCATATTTTAACAGCTACATGTGCTCCCAGGTTACGGGTTAATAAT
GGATACAAAATTTGGCATTATACTGGCTCTATCTTGCACAAGTATGATGTGCCATCAAATGCAGAATTATGGCAGGTTTC
TTGGCAGCCATTTTTGGATGGAATATTTCCAGCAAAAACAATAACTTACCAAGCAGTTCCAAGTGAAGTACCCAATGAGG
AACCTAAAGTTGCAACAGCTTATAGACCCCCAGCTTTAAGAAATAAACCAATCACCAATTCCAAATTGCATGAAGAGGAG
CCACCTCAGAATATGAAACCACAATCGGGAAACGATAAGCCATTATCAAAAACAGCTCTTAAAAATCAAAGGAAGCATGA
AGCTAAGAAAGCTGCAAAGCAGGAAGCAAGAAGTGACAAGAGTCCAGATTTGGCACCTACTCCTGCCCCACAGAGCACAC
CACGAAACACTGTCTCTCAGCCAATTTCTGGGGACCCTGAGATAGACAAAAAAATCAAGAACCTAAAGAAGAAACTGAAA
GCAATCGAACAACTGAAAGAACAAGCAGCAACTGGAAAACAGCTAGAAAAAAATCAGTTGGAGAAAATTCAGAAAGAAAC
AGCCCTTCTCCAGGAGCTGGAAGATTTGGAATTGGGTATTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 14 .65 RPM |
| SRP007412_cerebellum | 33 .32 RPM |
| SRP007412_heart | 14 .15 RPM |
| SRP007412_kidney | 24 .76 RPM |
| SRP007412_liver | 23 .75 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000001199 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000014002 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000144895 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000015391 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000003767 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000017696 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000003219 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000016095 | ortholog_one2many | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000015528 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000003374 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_517 | 71.65 | 71.11 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_652 | 69.18 | 82.50 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000029636 retrocopies