Parental gene:

EIF2A, ENSPPYG00000029636

Aliases:None
Description:eukaryotic translation initiation factor 2A, 65kDa [Source:HGNC Symbol;Acc:3254]
Organism:Orangutan (Pongo abelii)
Coordinates:3:153428879..153445343(+)


>ENSPPYG00000029636
ATGCTGTGGAATAAAAAAGCTACTGCTGTGTTGGTAATAGCTAGCACAGATGTTGACAAGACAGGAGCTTCCTACTATGG
AGAACAAACTCTACACTACATTGCAACAAATGGAGAAAGTGCTGTAGTGCAATTACCAAAAAATGGCCCCATTTATGATG
TAGTTTGGAATTCTAGTTCTACTGAGTTTTGTGCTGTATATGGTTTTATGCCTGCCAAAGCGACAATTTTCAACTTGAAA
TGTGATCCTGTATTTGACTTTGGAACTGGTCCTCGTAATGCAGCCTACTATAGCCCTCATGGACATATATTAGTATTAGC
TGGATTTGGAAATCTGAGGGGACAAATGGAAGTGTGGGATGTGAAAAACTACAAACTTATTTCTAAACCGGTGGCTTCTG
ATTCTACATATTTTGCTTGGTGCCCGGATGGTGAGCATATTTTAACAGCTACATGTGCTCCCAGGTTACGGGTTAATAAT
GGATACAAAATTTGGCATTATACTGGCTCTATCTTGCACAAGTATGATGTGCCATCAAATGCAGAATTATGGCAGGTTTC
TTGGCAGCCATTTTTGGATGGAATATTTCCAGCAAAAACAATAACTTACCAAGCAGTTCCAAGTGAAGTACCCAATGAGG
AACCTAAAGTTGCAACAGCTTATAGACCCCCAGCTTTAAGAAATAAACCAATCACCAATTCCAAATTGCATGAAGAGGAG
CCACCTCAGAATATGAAACCACAATCGGGAAACGATAAGCCATTATCAAAAACAGCTCTTAAAAATCAAAGGAAGCATGA
AGCTAAGAAAGCTGCAAAGCAGGAAGCAAGAAGTGACAAGAGTCCAGATTTGGCACCTACTCCTGCCCCACAGAGCACAC
CACGAAACACTGTCTCTCAGCCAATTTCTGGGGACCCTGAGATAGACAAAAAAATCAAGAACCTAAAGAAGAAACTGAAA
GCAATCGAACAACTGAAAGAACAAGCAGCAACTGGAAAACAGCTAGAAAAAAATCAGTTGGAGAAAATTCAGAAAGAAAC
AGCCCTTCTCCAGGAGCTGGAAGATTTGGAATTGGGTATTTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 14 .65 RPM
SRP007412_cerebellum 33 .32 RPM
SRP007412_heart 14 .15 RPM
SRP007412_kidney 24 .76 RPM
SRP007412_liver 23 .75 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000001199 ortholog_one2one 1 retrogene
retro_cjac_968,
Dasypus novemcinctus ENSDNOG00000014002 ortholog_one2one 1 retrogene
retro_dnov_1148,
Homo sapiens ENSG00000144895 ortholog_one2one 1 retrogene
retro_hsap_565,
Gorilla gorilla ENSGGOG00000015391 ortholog_one2one 1 retrogene
retro_ggor_509,
Loxodonta africana ENSLAFG00000003767 ortholog_one2one 1 retrogene
retro_lafr_502,
Macaca mulatta ENSMMUG00000017696 ortholog_one2one 1 retrogene
retro_mmul_2395,
Nomascus leucogenys ENSNLEG00000003219 ortholog_one2one 1 retrogene
retro_nleu_2213,
Oryctolagus cuniculus ENSOCUG00000016095 ortholog_one2many 3 retrogenes
retro_ocun_1771, retro_ocun_1825, retro_ocun_1861,
Pan troglodytes ENSPTRG00000015528 ortholog_one2one 1 retrogene
retro_ptro_423,
Ictidomys tridecemlineatus ENSSTOG00000003374 ortholog_one2one 1 retrogene
retro_itri_1706,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_517 71.65 71.11
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2. retro_pabe_652 69.18 82.50
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Download FASTA sequences of all ENSPPYG00000029636 retrocopies