Parental gene: | RAB8B, ENSDNOG00000023965 |
| Aliases: | None |
| Description: | RAB8B, member RAS oncogene family [Source:HGNC Symbol;Acc:30273] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_6485:212275..298033(+) |
>ENSDNOG00000023965
CTGTTCAAGCTGCTGCTGATCAGCGACTCGAGAGTGAGCAAGACTTGCCTCCTCTTCCGCTTCTCCGAGGACGCCTTCAA
CACCACCTTCATCTCCACCATCGGAATTGATTTTAAAATCAGAACGATAGAATTAGATGGAAAGAAAATTAAGCTTCAGA
TATGGGACACCGCGGGTCAGGAAAGATTCCGAACAATTACAACAGCATACTATAGAGGAGCCATGGGAATTATGCTGGTC
TATGACATCACAAATGAAAAATCCTTTGACAATATTAAAAATTGGATAAGAAACATTGAAGAGCATGCCTCTTCAGATGT
TGAAAGAATGATCCTGGGTAACAAATGTGATATGAATGACAAAAGACAAGTATCAAAAGAAAGAGGGGAGAAGTTAGCAA
TTGACTACGGGATTAAATTCTTGGAGACAAGTGCAAAATCCAGTACAAATGTAGAAGAGGCATTTTTTACACTTGCACGA
GATATAATGACAAAACTCAACCGAAAAATGAATGACAGCAATTCATCAGGAGCAGGTGGACCAGTGAAAATAACAGAAAA
TCGATCAAAGAAGACCAGTTTCTTCCGTTGTTCACTACTCTGA
CTGTTCAAGCTGCTGCTGATCAGCGACTCGAGAGTGAGCAAGACTTGCCTCCTCTTCCGCTTCTCCGAGGACGCCTTCAA
CACCACCTTCATCTCCACCATCGGAATTGATTTTAAAATCAGAACGATAGAATTAGATGGAAAGAAAATTAAGCTTCAGA
TATGGGACACCGCGGGTCAGGAAAGATTCCGAACAATTACAACAGCATACTATAGAGGAGCCATGGGAATTATGCTGGTC
TATGACATCACAAATGAAAAATCCTTTGACAATATTAAAAATTGGATAAGAAACATTGAAGAGCATGCCTCTTCAGATGT
TGAAAGAATGATCCTGGGTAACAAATGTGATATGAATGACAAAAGACAAGTATCAAAAGAAAGAGGGGAGAAGTTAGCAA
TTGACTACGGGATTAAATTCTTGGAGACAAGTGCAAAATCCAGTACAAATGTAGAAGAGGCATTTTTTACACTTGCACGA
GATATAATGACAAAACTCAACCGAAAAATGAATGACAGCAATTCATCAGGAGCAGGTGGACCAGTGAAAATAACAGAAAA
TCGATCAAAGAAGACCAGTTTCTTCCGTTGTTCACTACTCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 3 .89 RPM |
| SRP012922_cerebellum | 2 .34 RPM |
| SRP012922_heart | 1 .16 RPM |
| SRP012922_kidney | 1 .10 RPM |
| SRP012922_liver | 0 .31 RPM |
| SRP012922_lung | 3 .21 RPM |
| SRP012922_quadricep_muscle | 0 .87 RPM |
| SRP012922_spleen | 7 .10 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000007196 | ortholog_one2one | 3 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000025047 | other_paralog | 1 retrogene | |
| Microcebus murinus | ENSMICG00000007113 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000005217 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_23 | 100.00 | 62.50 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_1191 | 57.66 | 68.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_dnov_1981 | 74.80 | 63.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000023965 retrocopies