Parental gene: | MRPS31, ENSECAG00000003600 |
| Aliases: | None |
| Description: | mitochondrial ribosomal protein S31 [Source:HGNC Symbol;Acc:16632] |
| Organism: | Horse (Equus caballus) |
| Coordinates: | 17:18742805..18778545(-) |
>ENSECAG00000003600
AGGACACAAAATAATATCCAAAGATATTTTGGCACTAACAGCGTGATCTATAACAAGAAGGATGAACAGTCTGTTCCAAC
CCATGAGATTTCCAAGGAGACGGAGAGCCAAGACAGTGTAAAGGAGAATACGAAAAAAGACTTGTTAAACATTATTAAGG
GCATGAAAGTTGAATTAAGCACAGTAAATGTACAAACAACAAAGCCACCCAACAGAAGACAACTTAGAAGTTTGGAGGCC
ACAGTTGGCAGGCTTCAAAGAGCTCCTGAAGATGCCCCAAAGAAGAGAAGTGAGTCCCTGAGTCCTGAGTTGGTGGCTGC
TGCATCTGCTGTTGCAGATTCTCTCCCTTTTGACAAGCAGACAACCAAGTCAGAGCTGCTCAGGCAGCTCCGGCAGCACG
AGGAAGACTCAAGGGCACAGAAAGAAGGAGAAAGACCTAAAATTAGTTTCAGTAACATAATATCAGATATGAAAGTTGCC
AAGTCTGCCACAGCTCGAGTTAGCACGAGACCAGTGCATCAGATTCAGTTTGATGAAGGATCTGACGATTATGGTGGCCA
GGAGAAGACCGCTGATCTTAGGAAAAGGAAAAATATATTCAAGGGAAAGAGACTTAATATCTTTGATCTTAAGGCAGTTA
CTGAAGAGGCACCTGAAGCAGAGACAGCGCCTTCACTGTGGGATGTGGAATTTGCTAAGCAGTTAGCCGCAGTAAATGAA
CAGCCCTTTCAGAATGGTTTTGAAGAGATGATCCAGTGGACGAAAGAGGGGAAACTGTGGGAGTTCCCAATTAACAATGA
AGCAGGTTTTGATGATGATGGTTCAGAATTTTATGAACATGTATTTCTGGATAAATACCTGGAGGATTTTCCAAAACAAG
GACCAATTCGCCACTTCATGGAGCTGGTGACCTGCGGCCTTTCCAAAAACCCATATCTGAGTGTTAAACAGAAGGTCGAA
CACATAGAGTGGTTTAAAAATTATTTTAATGAAAAACGGGACATTCTAAAAGACAGTAACATACATTTCAATTAA
AGGACACAAAATAATATCCAAAGATATTTTGGCACTAACAGCGTGATCTATAACAAGAAGGATGAACAGTCTGTTCCAAC
CCATGAGATTTCCAAGGAGACGGAGAGCCAAGACAGTGTAAAGGAGAATACGAAAAAAGACTTGTTAAACATTATTAAGG
GCATGAAAGTTGAATTAAGCACAGTAAATGTACAAACAACAAAGCCACCCAACAGAAGACAACTTAGAAGTTTGGAGGCC
ACAGTTGGCAGGCTTCAAAGAGCTCCTGAAGATGCCCCAAAGAAGAGAAGTGAGTCCCTGAGTCCTGAGTTGGTGGCTGC
TGCATCTGCTGTTGCAGATTCTCTCCCTTTTGACAAGCAGACAACCAAGTCAGAGCTGCTCAGGCAGCTCCGGCAGCACG
AGGAAGACTCAAGGGCACAGAAAGAAGGAGAAAGACCTAAAATTAGTTTCAGTAACATAATATCAGATATGAAAGTTGCC
AAGTCTGCCACAGCTCGAGTTAGCACGAGACCAGTGCATCAGATTCAGTTTGATGAAGGATCTGACGATTATGGTGGCCA
GGAGAAGACCGCTGATCTTAGGAAAAGGAAAAATATATTCAAGGGAAAGAGACTTAATATCTTTGATCTTAAGGCAGTTA
CTGAAGAGGCACCTGAAGCAGAGACAGCGCCTTCACTGTGGGATGTGGAATTTGCTAAGCAGTTAGCCGCAGTAAATGAA
CAGCCCTTTCAGAATGGTTTTGAAGAGATGATCCAGTGGACGAAAGAGGGGAAACTGTGGGAGTTCCCAATTAACAATGA
AGCAGGTTTTGATGATGATGGTTCAGAATTTTATGAACATGTATTTCTGGATAAATACCTGGAGGATTTTCCAAAACAAG
GACCAATTCGCCACTTCATGGAGCTGGTGACCTGCGGCCTTTCCAAAAACCCATATCTGAGTGTTAAACAGAAGGTCGAA
CACATAGAGTGGTTTAAAAATTATTTTAATGAAAAACGGGACATTCTAAAAGACAGTAACATACATTTCAATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_synovial_membrane | 5 .00 RPM |
| SRP021940_embryo | 11 .99 RPM |
| SRP021940_cerebellum | 7 .17 RPM |
| SRP021940_testis | 15 .03 RPM |
| SRP021940_placental_villous | 8 .47 RPM |
| SRP021940_articular_cartilage | 6 .02 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000008470 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000001164 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000021467 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000024374 | ortholog_one2many | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000014606 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000005306 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000004428 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000007140 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000002170 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000012556 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_1028 | 75.49 | 58.43 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSECAG00000003600 retrocopies