Parental gene:

MRPS31, ENSOCUG00000021467

Aliases:None
Description:mitochondrial ribosomal protein S31 [Source:HGNC Symbol;Acc:16632]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:GL018719:3857869..3892149(-)


>ENSOCUG00000021467
ATGCATTACAACTGCTGGGTCTCGACGTTCCTGCCTCTTCGCCCCCTCACCCGCCTCCCTTTGTCCTGTGGAAGCCCGGA
GGCATCTGCGATTGCGGTCGTGCTGCTCGCTGCTCCGCCCGGAACAGTTAGGGCAAAAACTCATATCCAAAGATATTTCA
GCACGAATAATGTAGCCAACAGCAAAAAAGATGAAAAGTCTGTTTCCAGCGACGAGATTTCCAAGACGAATTCAGAGAGC
TCTGACAGAACAAAGGAGAACATGAAAAAAGACTTGTTGGATATTATTAAGGATATGAAAGTTGAATTAAGCACAGTGAA
CGTACAGACAACAAAACCACCCAACCGAAGGCTTCTGGAAGGTGAGGAGGCTGTAATTGGCAAGCTTCAAAGAGCTAAAA
AGGATGGCCCAAAGAAGAGAGATAAGCCTCTGAGTCCTGAGTTGGTGGCAGCTGCGACTGCTGTGGCAGATTCTCTCCCT
TTTGACAAGCAGAAGACCAAGTCAGACCCGCTCAGGCAGCTCCCAGCAGCCATGAGGAAGCCTCGTGGCACAGAGGAAGC
TAAAAGAAAACATTTCAGTTTCAGGAACATAATTTCAGATATGAAAGTTGCCAGACCTGCTACAGCTAGAGTTCATATAA
GACCAGAGCATCAGATTCAGTTTGACGAAGGATCTGACAGTTCCCTTGACCAGAAGACTACTGATCTTAGAAAAAGTATT
AGAAAAAATTTATTCAAGGGGAAGAGGCTTAATATTTTTGACTCTAAGACACTTACTGAAGAAGCACCTGAA

Library Parental gene expression (RPM)
SRP017611_brain 7 .73 RPM
SRP017611_kidney 6 .89 RPM
SRP017611_liver 5 .01 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000008470 ortholog_one2one 1 retrogene
retro_chof_586,
Equus caballus ENSECAG00000003600 ortholog_one2one 1 retrogene
retro_ecab_1028,
Nomascus leucogenys ENSNLEG00000001164 ortholog_one2one 1 retrogene
retro_nleu_1999,
Otolemur garnettii ENSOGAG00000024374 ortholog_one2many 1 retrogene
retro_ogar_914,
Ochotona princeps ENSOPRG00000014606 ortholog_one2one 1 retrogene
retro_opri_1137,
Pongo abelii ENSPPYG00000005306 ortholog_one2one 1 retrogene
retro_pabe_3785,
Sorex araneus ENSSARG00000004428 ortholog_one2one 1 retrogene
retro_sara_594,
Sarcophilus harrisii ENSSHAG00000007140 ortholog_one2one 1 retrogene
retro_shar_591,
Tarsius syrichta ENSTSYG00000002170 ortholog_one2one 1 retrogene
retro_tsyr_238,
Tursiops truncatus ENSTTRG00000012556 ortholog_one2one 1 retrogene
retro_ttru_1285,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_1747 63.75 59.09
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Download FASTA sequences of all ENSOCUG00000021467 retrocopies