Parental gene:

ARHGAP42, ENSECAG00000005829

Aliases:None
Description:Rho GTPase activating protein 42 [Source:HGNC Symbol;Acc:26545]
Organism:Horse (Equus caballus)
Coordinates:7:11159719..11224462(+)


>ENSECAG00000005829
ATGCAAAGGATGAAATCTGCCAACCAGGATTACAGACCACCCAGCCAATGGACGATGGAAGGCTATCTGTATGTCCAAGA
GAAACGACCACTTGGTTTTACATGGATTAAACATTATTGTACATATGATAAGGGAAGTAAAACATTTACAATGAGCGTTT
CAGAAATGAAATCCAGTGGGAAAATGAATGGCCTTGTTACCAGCTCACCAGAAATGTTTAAATTAAAATCTTGTATCCGA
AGAAAGACAGATTCAATTGACAAACGGTTCTGCTTTGACATAGAAGTAGTTGAAAGGCATGGGATCATCACGTTGCAGGC
CTTCTCCGAAGCTAATCGGAAGCTCTGGCTCGAAGCCATGGATGGGAAGGAACCGATTTACACCCTGCCTGCCATTATTA
GCAAGAAGGAAGAAATGTACTTGAATGAAGCAGGGTTCAACTTTGTAAGGAAATGCATTCAAGCTGTGGAAACAAGAGGC
ATCAACATTTTAGGCCTCTACCGAATAGGAGGTGTGAACTCTAAAGTTCAGAAACTCATGAACACCACATTTTCTCCAAA
ATCCCCTCCTGATATTGACATTGATATTGAACTGTGGGATAATAAGACAATAACAAGTGGGCTGAAAAACTACCTCAGGT
GCCTCGCAGAACCACTGATGACTTACAAGTTACACAAAGATTTTATTGTTGCTGTTAAGTCTGATGATCAAAATTACCGG
GTGGAGGCTGTGCATGCATTGGTGCACAAATTGCCAGAGAAAAACAGAGAGATGCTGGACATCTTAATAAAGCACCTGGT
CAAAGTATCACTACACAGTCAACAAAATCTCATGACTGTCTCAAACCTTGGTGTCATTTTTGGCCCAACTCTAATGAGAG
CACAGGAGGAAACTGTGGCTGCCATGATGAATATTAAATTTCAGAACATTGTGGTTGAAATTCTGATAGAGCACTATGAA
AAGATTTTTCATACTGCCCCAGACCCAAGCATTCCTCTGCCTCAGCCTCAGTCTCGATCTGGATCCCGAAGGACACGAGC
CATCTGCCTCTCCACAGGCTCCCGGAAGCCCAGAGGGAGGTATACTCCATGCCTGGCAGAACCTGATAGTGACTCCTATA
GCAGCAGCCCAGACAGCACACCCATGGGGAGCATCGAGTCGCTCTCCTCTCACTCTTCTGAACAAAACAGCACTACAAAG
TCCGCCTCCTGCCAGCCCAGGGAGAAATCTGGAGGGATTCCTTGGATTGCATCCCCATCACCTTCCAACGGACAGAAAAA
TCTTGGTCTCTGGACAACTAGTCCCGAATCAAGTTCTAGAGAAGATGCAACCAAAACAGATGCAGAATCCGATTGCCAGA
TCACTAGCCCAGGGGACACTTCCCCACCCATAGACCTGACCAAGAAAGGGCCTTATGGGCTTTCAGGACTGAAGAGAGCC
TCAGCTTCCTCTCTCAGATCCATCTCTGCCGCTGAAGGAAACAAGAGCTATAGTGGATCCATTCAAAGCCTAACTTCCAT
AGGTTCCAAGGAGACACCCAAAGCCGCACCAAACCCAGACCTGCCTCCAAAAATGTGCAGGAGGTTAAGGCTGGACACTG
CCTCAAGCAATGGCTACCAGCGACCTGGCTCCGTTGTGGCAGCTAAAGCCCAGCTGTTTGAAAATGTTGGTTCACTTAAG
CCAGTTTCTTCTGGGCGCCAAGCCAAAGCCATGTACTCCTGTAAAGCAGAGCACAGCCATGAGCTCTCC

Library Parental gene expression (RPM)
SRP021940_synovial_membrane 5 .46 RPM
SRP021940_embryo 12 .02 RPM
SRP021940_cerebellum 1 .45 RPM
SRP021940_testis 1 .85 RPM
SRP021940_placental_villous 9 .14 RPM
SRP021940_articular_cartilage 0 .47 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000165895 ortholog_one2one 2 retrogenes
retro_hsap_2156, retro_hsap_2318,
Gorilla gorilla ENSGGOG00000011397 ortholog_one2one 2 retrogenes
retro_ggor_1714, retro_ggor_1758,
Pongo abelii ENSPPYG00000003799 ortholog_one2one 1 retrogene
retro_pabe_2095,
Pan troglodytes ENSPTRG00000004204 ortholog_one2one 4 retrogenes
retro_ptro_1641, retro_ptro_1692, retro_ptro_3083, retro_ptro_892,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_997 78.88 99.14
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Download FASTA sequences of all ENSECAG00000005829 retrocopies