Parental gene: | ARHGAP42, ENSGGOG00000011397 |
| Aliases: | None |
| Description: | None |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | 11:98157842..98466359(+) |
>ENSGGOG00000011397
ATGGGGCTGCCCACTCTGGAGTTCAGCGATTCCTACTTGGACAGTCCAGATTTCAGGGAGCGCTTGCAGTGTCACGAGAT
TGAGCTGGAGCGAACCAACAAGTTCATCAAGGAGCTCATTAAGGACGGCTCTCTGCTCATTGGGGCGTTGAGGAATCTGT
CTATGGCAGTGCAGAAATTTTCCCAGTCATTGCAAGATTTCCAGTTTGAATGTATTGGTGATGCTGAAACAGATGATGAA
ATTAGTATTGCTCAGTCACTAAAAGAATTTGCAAGACTACTTATTGCAGTAGAAGAAGAAAGGCGAAGACTGATCCAAAA
CGCTAACGATGTATTAATTGCACCACTTGAGAAATTTCGAAAAGAACAGATAGGTGCAGCAAAAGATGGAAAGAAGAAGT
TTGACAAAGAGAGTGAAAAATATTACTCTATCCTTGAAAAGCATTTAAATTTGTCCGCAAAGAAAAAGGAGTCTCATTTA
CAAGAGGCAGATACACAAATTGACCGAGAACATCAGAACTTCTATGAAGCATCATTAGAATATGTCTTTAAAATTCAAGA
GGTCCAAGAAAAAAAGAAGTTTGAATTTGTTGAACCGCTTTTGTCATTTCTTCAGGGCTTATTTACTTTTTACCATGAGG
GATATGAACTTGCCCAGGAATTTGCACCGTATAAGCAACAGCTGCAGTTCAACTTGCAGAATACAAGGAATAATTTTGAA
AGTACTCGACAAGAGGTAGAGCGGTTGATGCAAAGGATGAAATCTGCTAACCAGGACTACAGACCACCCAGCCAGTGGAC
CATGGAAGGCTATCTGTATGTCCAGGAGAAACGACCACTTGGTTTTACATGGATTAAACATTATTGTACGTATGATAAGG
GAAGTAAAACATTTACAATGAGTGTTTCAGAAATGAAATCCAGTGGGAAAATGAATGGCCTTGTTACTAGCTCACCGGAA
ATGTTTAAATTAAAATCTTGTATCCGACGAAAGACAGATTCAATTGACAAACGATTCTGCTTTGACATAGAAGTAGTTGA
AAGGCATGGGATCATCACGTTACAGGCCTTCTCAGAAGCTAATAGGAAACTCTGGCTTGAAGCCATGGATGGGAAGGAAC
CGATTTATACTCTGCCTGCCATTATAAGCAAGAAAGAAGAAATGTATTTGAATGAAGCAGGGTTCAACTTTGTGAGAAAA
TGCATTCAAGCTGTGGAAACAAGAGGTATCACCATTTTAGGACTCTACCGAATAGGAGGAGTGAACTCCAAAGTTCAAAA
ACTCATGAATACCACATTTTCTCCTAAATCCCCTCCTGATATTGATATTGATATTGAACTGTGGGACAATAAGACGATAA
CAAGTGGGCTGAAAAACTACCTCAGGTGCCTTGCAGAACCACTGATGACTTACAAGTTGCACAAAGATTTTATCATTGCT
GTTAAATCTGATGACCAAAACTACAGGGTGGAGGCTGTACATGCATTGGTGCACAAATTGCCGGAGAAAAACAGAGAGAT
GCTGGACATCTTAATAAAGCATCTGGTCAAAGTATCACTACACAGCCAACAAAATCTCATGACTGTCTCAAATCTTGGTG
TCATATTTGGCCCAACTCTAATGAGAGCACAGGAAGAAACTGTGGCTGCTATGATGAATATTAAATTTCAGAATATTGTG
GTAGAAATTCTGATAGAGCACTATGAAAAGATTTTTCATACTGCTCCAGACCCAAGCATTCCTCTTCCTCAGCCTCAGTC
TCGATCTGGATCCCGAAGGACGCGAGCAATCTGCCTCTCTACAGGGTCTAGGAAGCCCAGAGGGAGGTATACTCCATGCC
TGGCTGAACCTGATAGTGACTCCTATAGCAGCAGCCCAGACAGCACACCTATGGGGAGCATTGAGTCACTCTCTTCTCAT
TCCTCTGAACAAAATAGCACTACAAAGTCAGCTTCCTGCCAGCCCAGGGAGAAATCTGGAGGGATTCCTTGGATTGCAAC
CCCGTCATCTTCCAATGGACAGAAAAGCCTTGGTCTCTGGACAACTAGTCCTGAATCAAGTTCCAGAGAAGATGCAACCA
AGACAGATGCAGAATCAGACTGCCAGAGTGTTGCTTCGGTCACTAGCCCAGGAGACGTTTCCCCACCCATAGACCTAGTC
AAGAAAGAGCCTTATGGGCTTTCAGGACTGAAAAGAGCTTCTGCTTCTTCTCTCAGATCCATCTCTGCAGCTGAAGGAAA
CAAGAGCTACAGTGGATCTATTCAAAGCTTAACTTCTGTAGGTTCCAAGGAGACACCCAAAGCTTCACCAAACCCAGACC
TGCCTCCGAAAATGTGCAGGAGATTAAGACTAGACACTGCCTCAAGCAATGGCTATCAGCGTCCTGGCTCAGTAGTGGCA
GCAAAAGCTCAACTGTTTGAAAATGTTGGTTCACCTAAACCAGTTTCTTCTGGGCGCCAAGCCAAAGCCATGTACTCCTG
TAAAGCAGAGCACAGTCATGAGCTTTCCTTCCCACAAGGAGCGATATTTTCTAATGTGTACCCATCAGTGGAACCAGGAT
GGTTAAAGGCAACTTATGAAGGCAAAACAGGACTAGTTCCAGAAAATTATGTTGTCTTCCTCTAA
ATGGGGCTGCCCACTCTGGAGTTCAGCGATTCCTACTTGGACAGTCCAGATTTCAGGGAGCGCTTGCAGTGTCACGAGAT
TGAGCTGGAGCGAACCAACAAGTTCATCAAGGAGCTCATTAAGGACGGCTCTCTGCTCATTGGGGCGTTGAGGAATCTGT
CTATGGCAGTGCAGAAATTTTCCCAGTCATTGCAAGATTTCCAGTTTGAATGTATTGGTGATGCTGAAACAGATGATGAA
ATTAGTATTGCTCAGTCACTAAAAGAATTTGCAAGACTACTTATTGCAGTAGAAGAAGAAAGGCGAAGACTGATCCAAAA
CGCTAACGATGTATTAATTGCACCACTTGAGAAATTTCGAAAAGAACAGATAGGTGCAGCAAAAGATGGAAAGAAGAAGT
TTGACAAAGAGAGTGAAAAATATTACTCTATCCTTGAAAAGCATTTAAATTTGTCCGCAAAGAAAAAGGAGTCTCATTTA
CAAGAGGCAGATACACAAATTGACCGAGAACATCAGAACTTCTATGAAGCATCATTAGAATATGTCTTTAAAATTCAAGA
GGTCCAAGAAAAAAAGAAGTTTGAATTTGTTGAACCGCTTTTGTCATTTCTTCAGGGCTTATTTACTTTTTACCATGAGG
GATATGAACTTGCCCAGGAATTTGCACCGTATAAGCAACAGCTGCAGTTCAACTTGCAGAATACAAGGAATAATTTTGAA
AGTACTCGACAAGAGGTAGAGCGGTTGATGCAAAGGATGAAATCTGCTAACCAGGACTACAGACCACCCAGCCAGTGGAC
CATGGAAGGCTATCTGTATGTCCAGGAGAAACGACCACTTGGTTTTACATGGATTAAACATTATTGTACGTATGATAAGG
GAAGTAAAACATTTACAATGAGTGTTTCAGAAATGAAATCCAGTGGGAAAATGAATGGCCTTGTTACTAGCTCACCGGAA
ATGTTTAAATTAAAATCTTGTATCCGACGAAAGACAGATTCAATTGACAAACGATTCTGCTTTGACATAGAAGTAGTTGA
AAGGCATGGGATCATCACGTTACAGGCCTTCTCAGAAGCTAATAGGAAACTCTGGCTTGAAGCCATGGATGGGAAGGAAC
CGATTTATACTCTGCCTGCCATTATAAGCAAGAAAGAAGAAATGTATTTGAATGAAGCAGGGTTCAACTTTGTGAGAAAA
TGCATTCAAGCTGTGGAAACAAGAGGTATCACCATTTTAGGACTCTACCGAATAGGAGGAGTGAACTCCAAAGTTCAAAA
ACTCATGAATACCACATTTTCTCCTAAATCCCCTCCTGATATTGATATTGATATTGAACTGTGGGACAATAAGACGATAA
CAAGTGGGCTGAAAAACTACCTCAGGTGCCTTGCAGAACCACTGATGACTTACAAGTTGCACAAAGATTTTATCATTGCT
GTTAAATCTGATGACCAAAACTACAGGGTGGAGGCTGTACATGCATTGGTGCACAAATTGCCGGAGAAAAACAGAGAGAT
GCTGGACATCTTAATAAAGCATCTGGTCAAAGTATCACTACACAGCCAACAAAATCTCATGACTGTCTCAAATCTTGGTG
TCATATTTGGCCCAACTCTAATGAGAGCACAGGAAGAAACTGTGGCTGCTATGATGAATATTAAATTTCAGAATATTGTG
GTAGAAATTCTGATAGAGCACTATGAAAAGATTTTTCATACTGCTCCAGACCCAAGCATTCCTCTTCCTCAGCCTCAGTC
TCGATCTGGATCCCGAAGGACGCGAGCAATCTGCCTCTCTACAGGGTCTAGGAAGCCCAGAGGGAGGTATACTCCATGCC
TGGCTGAACCTGATAGTGACTCCTATAGCAGCAGCCCAGACAGCACACCTATGGGGAGCATTGAGTCACTCTCTTCTCAT
TCCTCTGAACAAAATAGCACTACAAAGTCAGCTTCCTGCCAGCCCAGGGAGAAATCTGGAGGGATTCCTTGGATTGCAAC
CCCGTCATCTTCCAATGGACAGAAAAGCCTTGGTCTCTGGACAACTAGTCCTGAATCAAGTTCCAGAGAAGATGCAACCA
AGACAGATGCAGAATCAGACTGCCAGAGTGTTGCTTCGGTCACTAGCCCAGGAGACGTTTCCCCACCCATAGACCTAGTC
AAGAAAGAGCCTTATGGGCTTTCAGGACTGAAAAGAGCTTCTGCTTCTTCTCTCAGATCCATCTCTGCAGCTGAAGGAAA
CAAGAGCTACAGTGGATCTATTCAAAGCTTAACTTCTGTAGGTTCCAAGGAGACACCCAAAGCTTCACCAAACCCAGACC
TGCCTCCGAAAATGTGCAGGAGATTAAGACTAGACACTGCCTCAAGCAATGGCTATCAGCGTCCTGGCTCAGTAGTGGCA
GCAAAAGCTCAACTGTTTGAAAATGTTGGTTCACCTAAACCAGTTTCTTCTGGGCGCCAAGCCAAAGCCATGTACTCCTG
TAAAGCAGAGCACAGTCATGAGCTTTCCTTCCCACAAGGAGCGATATTTTCTAATGTGTACCCATCAGTGGAACCAGGAT
GGTTAAAGGCAACTTATGAAGGCAAAACAGGACTAGTTCCAGAAAATTATGTTGTCTTCCTCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 5 .75 RPM |
| SRP007412_cerebellum | 2 .68 RPM |
| SRP007412_heart | 1 .06 RPM |
| SRP007412_kidney | 14 .72 RPM |
| SRP007412_liver | 7 .31 RPM |
| SRP007412_testis | 13 .47 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Equus caballus | ENSECAG00000005829 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000165895 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000003799 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000004204 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_1714 | 89.33 | 60.76 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ggor_1758 | 90.60 | 62.93 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSGGOG00000011397 retrocopies