Parental gene: | ARHGAP42, ENSG00000165895 |
| Aliases: | ARHGAP42, GRAF3 |
| Description: | Rho GTPase activating protein 42 [Source:HGNC Symbol;Acc:26545] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 11:100558383..100862668(+) |
>ENSG00000165895
ATGGGGCTGCCCACTCTGGAGTTCAGCGATTCCTACTTGGACAGCCCAGATTTCAGGGAGCGCTTGCAGTGTCACGAGAT
TGAGCTGGAGCGAACCAACAAGTTCATCAAGGAGCTCATTAAGGACGGCTCTCTGCTCATTGGGGCGTTGAGGAATCTGT
CTATGGCAGTGCAGAAATTTTCCCAGTCATTGCAAGATTTCCAGTTTGAATGTATTGGTGATGCTGAAACAGATGATGAA
ATTAGTATTGCTCAGTCACTAAAAGAATTTGCAAGACTACTCATTGCAGTAGAAGAAGAAAGGCGAAGACTGATCCAAAA
CGCTAACGATGTATTAATTGCACCACTTGAGAAATTTCGAAAAGAACAGATAGGTGCAGCAAAAGATGGAAAGAAGAAGT
TTGACAAAGAGAGTGAAAAATATTACTCTATCCTTGAAAAGCATTTAAATTTGTCCGCAAAGAAAAAGGAGTCTCATTTA
CAAGAGGCAGATACACAAATTGACCGAGAACATCAGAACTTCTATGAAGCATCATTAGAATATGTCTTTAAAATTCAAGA
GGTCCAAGAAAAAAAGAAGTTTGAATTTGTTGAACCGCTTTTGTCATTTCTTCAGGGCTTATTTACTTTTTACCATGAGG
GATATGAACTTGCCCAGGAATTTGCACCGTATAAGCAACAGCTGCAGTTCAACTTGCAGAATACAAGGAATAATTTTGAA
AGTACTCGACAAGAGGTAGAGCGGTTGATGCAAAGGATGAAATCTGCTAACCAGGACTACAGACCACCCAGCCAGTGGAC
GATGGAAGGCTATCTGTATGTCCAGGAGAAACGACCGCTTGGTTTTACATGGATTAAACATTATTGTACATATGATAAGG
GAAGTAAAACATTTACAATGAGTGTTTCAGAAATGAAATCCAGTGGGAAAATGAATGGCCTTGTTACTAGCTCACCGGAA
ATGTTTAAATTAAAATCTTGTATCCGACGAAAGACAGATTCAATTGACAAACGATTCTGCTTTGACATAGAAGTAGTTGA
AAGGCATGGGATCATCACGTTACAGGCCTTCTCAGAAGCTAATAGGAAACTCTGGCTTGAAGCCATGGATGGGAAGGAAC
CGATTTATACTCTGCCTGCCATTATAAGCAAGAAAGAAGAAATGTATTTGAATGAAGCAGGGTTCAACTTTGTGAGAAAA
TGCATTCAAGCTGTGGAAACAAGAGGTATCACCATTTTAGGACTCTACCGAATAGGAGGAGTGAACTCCAAAGTTCAAAA
ACTCATGAATACCACATTTTCTCCTAAATCCCCTCCTGATATTGATATTGATATTGAACTGTGGGACAATAAGACGATAA
CAAGTGGGCTGAAAAACTACCTCAGGTGCCTTGCAGAACCACTGATGACTTACAAGTTGCACAAAGATTTTATCATTGCT
GTTAAATCTGATGATCAAAACTACAGGGTGGAGGCTGTACATGCATTGGTGCACAAATTGCCGGAGAAAAACAGAGAGAT
GCTGGACATCTTAATAAAGCATCTGGTCAAAGTATCACTACACAGCCAACAAAATCTCATGACTGTCTCAAATCTTGGTG
TCATATTTGGCCCAACTCTAATGAGAGCACAGGAAGAAACTGTGGCTGCTATGATGAATATTAAATTTCAGAATATTGTG
GTAGAAATTCTGATAGAGCACTATGAAAAGATTTTTCATACTGCTCCAGACCCAAGCATTCCTCTTCCTCAGCCTCAGTC
TCGATCTGGATCCCGAAGGACACGAGCAATCTGCCTCTCTACAGGGTCTAGGAAGCCCAGAGGGAGGTATACTCCATGCC
TGGCCGAACCTGATAGTGACTCCTATAGCAGCAGCCCAGACAGCACACCTATGGGGAGCATTGAGTCACTCTCTTCTCAT
TCCTCTGAACAAAATAGCACTACAAAGTCAGCTTCCTGCCAGCCCAGGGAGAAATCTGGAGGGATTCCTTGGATTGCAAC
CCCATCATCTTCCAATGGACAGAAAAGCCTTGGTCTGTGGACAACTAGTCCTGAATCAAGTTCCAGAGAAGATGCAACCA
AGACAGATGCAGAATCAGACTGCCAGAGTGTTGCTTCAGTCACTAGCCCAGGAGACGTTTCCCCACCCATAGACCTAGTC
AAGAAAGAGCCTTATGGGCTTTCAGGACTGAAAAGAGCTTCTGCTTCTTCTCTCAGATCCATCTCTGCAGCTGAAGGAAA
CAAGAGCTACAGTGGATCTATTCAAAGCTTAACTTCTGTAGGTTCCAAGGAGACACCCAAAGCTTCACCAAACCCAGACC
TGCCTCCGAAAATGTGCAGGAGATTAAGACTAGACACTGCCTCAAGCAATGGCTATCAGCGGCCTGGCTCAGTAGTGGCA
GCAAAAGCTCAACTGTTTGAAAATGTTGGTTCACCTAAACCAGTTTCTTCTGGGCGCCAAGCCAAAGCCATGTACTCCTG
TAAAGCAGAGCACAGTCATGAGCTTTCCTTCCCACAAGGAGCAATATTTTCTAATGTGTACCCATCAGTGGAACCAGGAT
GGTTAAAGGCAACTTATGAAGGCAAAACAGGACTAGTTCCAGAAAATTATGTTGTCTTCCTCTAA
ATGGGGCTGCCCACTCTGGAGTTCAGCGATTCCTACTTGGACAGCCCAGATTTCAGGGAGCGCTTGCAGTGTCACGAGAT
TGAGCTGGAGCGAACCAACAAGTTCATCAAGGAGCTCATTAAGGACGGCTCTCTGCTCATTGGGGCGTTGAGGAATCTGT
CTATGGCAGTGCAGAAATTTTCCCAGTCATTGCAAGATTTCCAGTTTGAATGTATTGGTGATGCTGAAACAGATGATGAA
ATTAGTATTGCTCAGTCACTAAAAGAATTTGCAAGACTACTCATTGCAGTAGAAGAAGAAAGGCGAAGACTGATCCAAAA
CGCTAACGATGTATTAATTGCACCACTTGAGAAATTTCGAAAAGAACAGATAGGTGCAGCAAAAGATGGAAAGAAGAAGT
TTGACAAAGAGAGTGAAAAATATTACTCTATCCTTGAAAAGCATTTAAATTTGTCCGCAAAGAAAAAGGAGTCTCATTTA
CAAGAGGCAGATACACAAATTGACCGAGAACATCAGAACTTCTATGAAGCATCATTAGAATATGTCTTTAAAATTCAAGA
GGTCCAAGAAAAAAAGAAGTTTGAATTTGTTGAACCGCTTTTGTCATTTCTTCAGGGCTTATTTACTTTTTACCATGAGG
GATATGAACTTGCCCAGGAATTTGCACCGTATAAGCAACAGCTGCAGTTCAACTTGCAGAATACAAGGAATAATTTTGAA
AGTACTCGACAAGAGGTAGAGCGGTTGATGCAAAGGATGAAATCTGCTAACCAGGACTACAGACCACCCAGCCAGTGGAC
GATGGAAGGCTATCTGTATGTCCAGGAGAAACGACCGCTTGGTTTTACATGGATTAAACATTATTGTACATATGATAAGG
GAAGTAAAACATTTACAATGAGTGTTTCAGAAATGAAATCCAGTGGGAAAATGAATGGCCTTGTTACTAGCTCACCGGAA
ATGTTTAAATTAAAATCTTGTATCCGACGAAAGACAGATTCAATTGACAAACGATTCTGCTTTGACATAGAAGTAGTTGA
AAGGCATGGGATCATCACGTTACAGGCCTTCTCAGAAGCTAATAGGAAACTCTGGCTTGAAGCCATGGATGGGAAGGAAC
CGATTTATACTCTGCCTGCCATTATAAGCAAGAAAGAAGAAATGTATTTGAATGAAGCAGGGTTCAACTTTGTGAGAAAA
TGCATTCAAGCTGTGGAAACAAGAGGTATCACCATTTTAGGACTCTACCGAATAGGAGGAGTGAACTCCAAAGTTCAAAA
ACTCATGAATACCACATTTTCTCCTAAATCCCCTCCTGATATTGATATTGATATTGAACTGTGGGACAATAAGACGATAA
CAAGTGGGCTGAAAAACTACCTCAGGTGCCTTGCAGAACCACTGATGACTTACAAGTTGCACAAAGATTTTATCATTGCT
GTTAAATCTGATGATCAAAACTACAGGGTGGAGGCTGTACATGCATTGGTGCACAAATTGCCGGAGAAAAACAGAGAGAT
GCTGGACATCTTAATAAAGCATCTGGTCAAAGTATCACTACACAGCCAACAAAATCTCATGACTGTCTCAAATCTTGGTG
TCATATTTGGCCCAACTCTAATGAGAGCACAGGAAGAAACTGTGGCTGCTATGATGAATATTAAATTTCAGAATATTGTG
GTAGAAATTCTGATAGAGCACTATGAAAAGATTTTTCATACTGCTCCAGACCCAAGCATTCCTCTTCCTCAGCCTCAGTC
TCGATCTGGATCCCGAAGGACACGAGCAATCTGCCTCTCTACAGGGTCTAGGAAGCCCAGAGGGAGGTATACTCCATGCC
TGGCCGAACCTGATAGTGACTCCTATAGCAGCAGCCCAGACAGCACACCTATGGGGAGCATTGAGTCACTCTCTTCTCAT
TCCTCTGAACAAAATAGCACTACAAAGTCAGCTTCCTGCCAGCCCAGGGAGAAATCTGGAGGGATTCCTTGGATTGCAAC
CCCATCATCTTCCAATGGACAGAAAAGCCTTGGTCTGTGGACAACTAGTCCTGAATCAAGTTCCAGAGAAGATGCAACCA
AGACAGATGCAGAATCAGACTGCCAGAGTGTTGCTTCAGTCACTAGCCCAGGAGACGTTTCCCCACCCATAGACCTAGTC
AAGAAAGAGCCTTATGGGCTTTCAGGACTGAAAAGAGCTTCTGCTTCTTCTCTCAGATCCATCTCTGCAGCTGAAGGAAA
CAAGAGCTACAGTGGATCTATTCAAAGCTTAACTTCTGTAGGTTCCAAGGAGACACCCAAAGCTTCACCAAACCCAGACC
TGCCTCCGAAAATGTGCAGGAGATTAAGACTAGACACTGCCTCAAGCAATGGCTATCAGCGGCCTGGCTCAGTAGTGGCA
GCAAAAGCTCAACTGTTTGAAAATGTTGGTTCACCTAAACCAGTTTCTTCTGGGCGCCAAGCCAAAGCCATGTACTCCTG
TAAAGCAGAGCACAGTCATGAGCTTTCCTTCCCACAAGGAGCAATATTTTCTAATGTGTACCCATCAGTGGAACCAGGAT
GGTTAAAGGCAACTTATGAAGGCAAAACAGGACTAGTTCCAGAAAATTATGTTGTCTTCCTCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 10 .20 RPM |
| bodymap2_lung | 35 .09 RPM |
| bodymap2_breast | 23 .48 RPM |
| bodymap2_adipose | 25 .46 RPM |
| bodymap2_adrenal | 17 .42 RPM |
| bodymap2_skeletal_muscle | 5 .98 RPM |
| bodymap2_thyroid | 22 .86 RPM |
| bodymap2_prostate | 8 .92 RPM |
| bodymap2_colon | 13 .59 RPM |
| bodymap2_testis | 16 .68 RPM |
| bodymap2_brain | 9 .33 RPM |
| bodymap2_heart | 11 .82 RPM |
| bodymap2_white_blood_cells | 1 .75 RPM |
| bodymap2_lymph_node | 17 .27 RPM |
| bodymap2_ovary | 10 .26 RPM |
| bodymap2_kidney | 16 .71 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Equus caballus | ENSECAG00000005829 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000011397 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000003799 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000004204 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_2156 | 90.05 | 65.48 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_2318 | 90.22 | 62.93 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000165895 retrocopies