Parental gene:

EIF3J, ENSECAG00000008716

Aliases:None
Description:eukaryotic translation initiation factor 3, subunit J [Source:HGNC Symbol;Acc:3270]
Organism:Horse (Equus caballus)
Coordinates:1:144603577..144612663(-)


>ENSECAG00000008716
GATAACTGGGATGATGATGATGACGAAAAAAAAGAGGAAGCAGAAGTAAAACCAGAAGTAAAAATTTCAGAAAAGAAAAA
AATAGCAGAGAAGATAAAAGAGAAAGAACGACAACAGAAGAAAAGGCAAGAAGAAATTAAAAAGAGGTTAGAAGAACCTG
AAGAACCTAAAGTGTTAACACCAGAAGAACAATTAGCAGATAAACTCCGGCTAAAGAAATTACAGGAAGAGTCAGACCTC
GAATTAGCAAAAGAAACTTTTGGTGTTAATAATACAGTTTATGGAATAGATGCTATGAACCCATCTTCAAGAGATGACTT
CACAGAGTTTGGAAAGTTGTTAAAAGATAAAATTACACAATATGAAAAGTCACTATATTATGCCAGTTTTTTGGAAGCCT
TAGTTCGAGATGTGTGTATTTCATTGGAAATTGATGACTTGAAAAAGATTACCAATTCATTGACTGTGCTTTGCAGTGAA
AAACAGAAGCAAGAAAAGCAAAGCAAAGCCAAAAAGAAGAAGAAAGGTGTGGTTCCTGGAGGGGGATTAAAGGCCACCAT
GAAAGATGATCTGGCAGATTATGGTGGTTATGATGGAGGATATGTACAAGACTATGAAGACTTCATGTGA

Library Parental gene expression (RPM)
SRP021940_synovial_membrane 3 .02 RPM
SRP021940_embryo 5 .40 RPM
SRP021940_cerebellum 2 .60 RPM
SRP021940_testis 4 .35 RPM
SRP021940_placental_villous 3 .27 RPM
SRP021940_articular_cartilage 2 .42 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000002412 possible_ortholog 1 retrogene
retro_cjac_589,
Homo sapiens ENSG00000104131 ortholog_one2one 1 retrogene
retro_hsap_4189,
Gorilla gorilla ENSGGOG00000000548 ortholog_one2one 2 retrogenes
retro_ggor_1687, retro_ggor_41,
Macropus eugenii ENSMEUG00000010372 ortholog_one2one 1 retrogene
retro_meug_256,
Microcebus murinus ENSMICG00000005006 ortholog_one2one 1 retrogene
retro_mmur_100,
Monodelphis domestica ENSMODG00000017696 possible_ortholog 1 retrogene
retro_mdom_141,
Mus musculus ENSMUSG00000027236 possible_ortholog 1 retrogene
retro_mmus_18,
Nomascus leucogenys ENSNLEG00000005568 ortholog_one2one 1 retrogene
retro_nleu_2848,
Otolemur garnettii ENSOGAG00000004694 ortholog_one2one 1 retrogene
retro_ogar_1227,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_635 87.20 77.99
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Download FASTA sequences of all ENSECAG00000008716 retrocopies