Parental gene: | EIF3J, ENSGGOG00000000548 |
| Aliases: | None |
| Description: | None |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | 15:23278821..23306546(+) |
>ENSGGOG00000000548
GGCGGGGACCGCTGGGAAGGCGAGGACGAGGACGAGGACGTCAAGGATAACTGGGATGACGATGATGATGAAAAAAAAGA
GGAAGCAGAAGTAAAACCAGAGGTAAAAATTTCAGAAAAGAAAAAAATAGCAGAGAAGATAAAAGAGAAAGAACGGCAAC
AGAAGAAAAGGCAAGAAGAAATTAAAAAGAGGTTAGAAGAACCTGAAGAACCTAAAGTGCTAACACCAGAAGAACAATTA
GCAGATAAACTGCGGCTAAAGAAATTACAGGAAGAGTCAGACCTCGAATTAGCAAAGGAAACTTTTGGTGTTAATAATAC
AGTTTATGGAATAGATGCTATGAACCCATCTTCAAGAGATGACTTTACAGAGTTTGGAAAGTTACTAAAAGATAAAATTA
CACAATATGAGAAGTCACTATATTATGCCAGTTTTTTGGAAGTCTTAGTTCGAGATGTGTGTATTTCATTGGAAATTGAT
GACTTGAAAAAAATTACCAATTCACTGACTGTGCTTTGCAGTGAAAAACAGAAGCAAGAAAAGCAAAGCAAAGCCAAAAA
GAAGAAGAAAGGTGTGGTTCCTGGAGGGGGATTAAAAGCCACCATGAAAGATGATCTGGCAGATTATGGTGGTTATGATG
GAGGATATGTACAAGACTATGAAGACTTCATGTGA
GGCGGGGACCGCTGGGAAGGCGAGGACGAGGACGAGGACGTCAAGGATAACTGGGATGACGATGATGATGAAAAAAAAGA
GGAAGCAGAAGTAAAACCAGAGGTAAAAATTTCAGAAAAGAAAAAAATAGCAGAGAAGATAAAAGAGAAAGAACGGCAAC
AGAAGAAAAGGCAAGAAGAAATTAAAAAGAGGTTAGAAGAACCTGAAGAACCTAAAGTGCTAACACCAGAAGAACAATTA
GCAGATAAACTGCGGCTAAAGAAATTACAGGAAGAGTCAGACCTCGAATTAGCAAAGGAAACTTTTGGTGTTAATAATAC
AGTTTATGGAATAGATGCTATGAACCCATCTTCAAGAGATGACTTTACAGAGTTTGGAAAGTTACTAAAAGATAAAATTA
CACAATATGAGAAGTCACTATATTATGCCAGTTTTTTGGAAGTCTTAGTTCGAGATGTGTGTATTTCATTGGAAATTGAT
GACTTGAAAAAAATTACCAATTCACTGACTGTGCTTTGCAGTGAAAAACAGAAGCAAGAAAAGCAAAGCAAAGCCAAAAA
GAAGAAGAAAGGTGTGGTTCCTGGAGGGGGATTAAAAGCCACCATGAAAGATGATCTGGCAGATTATGGTGGTTATGATG
GAGGATATGTACAAGACTATGAAGACTTCATGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 17 .65 RPM |
| SRP007412_cerebellum | 12 .37 RPM |
| SRP007412_heart | 5 .38 RPM |
| SRP007412_kidney | 19 .22 RPM |
| SRP007412_liver | 11 .05 RPM |
| SRP007412_testis | 41 .34 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000002412 | possible_ortholog | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000012396 | possible_ortholog | 3 retrogenes | |
| Equus caballus | ENSECAG00000008716 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000005052 | possible_ortholog | 1 retrogene | |
| Homo sapiens | ENSG00000104131 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000010372 | ortholog_one2many | 1 retrogene | |
| Microcebus murinus | ENSMICG00000005006 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000017696 | possible_ortholog | 1 retrogene | |
| Mus musculus | ENSMUSG00000027236 | possible_ortholog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000005568 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000005376 | possible_ortholog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000004694 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_41 | 71.65 | 56.70 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ggor_1687 | 67.50 | 52.23 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSGGOG00000000548 retrocopies