Parental gene: | SGTA, ENSECAG00000010381 |
| Aliases: | None |
| Description: | small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha [Source:HGNC Symbol;Acc:10819] |
| Organism: | Horse (Equus caballus) |
| Coordinates: | Un0230:34012..40847(-) |
>ENSECAG00000010381
GGGAACGAGCAGATGAAGGTAGAGAACTTCGAAGCCGCCGTGCACTTCTACGGAAAAGCCATCGAGCTGAACCCGGCCAA
CGCCGTCTATTTCTGTAACAGAGCCGCGGCCTACAGCAAACTGGGGAACTACGCCGGTGCGGTGCAGGACTGCGAGCGGG
CCATCTGCATAGACCCATCCTACAGCAAGGCCTATGGCAGGATGGGCCTGGCGCTTTCCAGTCTGAACAAGCACACCGAG
GCCGTAGCCTACTACAAAAAGGCCCTGGAGCTGGACCCCGACAACGAGAAGTACAAGTCGAACCTCAAGATAGCGGAACT
GAAGCTGCAAGAGGGGACCAGCCCCACAGGAGGTGTCGGCAGCTTCGACATCGCGGGCCTGCTGAACAACCCAAGCTTCA
TGAGCATGGCGTCCAACCTAATGAACAATCCCCAAGTTCAGCAGCTTATGTCCGGGATGATTTCTGGCGGCCACAACCCC
CTGGGCACTCCGGGCACCAGCCCCTCGCAGAACGACCTGGCCAGCCTCATCCAGGCGGGCCAGCAGTTCGCTCAGCAGAT
GCAGCAGCAGAACCCAGAGTTGATAGAACAGCTCCGCAGTCAGATCCGAAGTCGGACCCCCAGTGCCAGCAACGACGACC
AGCAGGAATGA
GGGAACGAGCAGATGAAGGTAGAGAACTTCGAAGCCGCCGTGCACTTCTACGGAAAAGCCATCGAGCTGAACCCGGCCAA
CGCCGTCTATTTCTGTAACAGAGCCGCGGCCTACAGCAAACTGGGGAACTACGCCGGTGCGGTGCAGGACTGCGAGCGGG
CCATCTGCATAGACCCATCCTACAGCAAGGCCTATGGCAGGATGGGCCTGGCGCTTTCCAGTCTGAACAAGCACACCGAG
GCCGTAGCCTACTACAAAAAGGCCCTGGAGCTGGACCCCGACAACGAGAAGTACAAGTCGAACCTCAAGATAGCGGAACT
GAAGCTGCAAGAGGGGACCAGCCCCACAGGAGGTGTCGGCAGCTTCGACATCGCGGGCCTGCTGAACAACCCAAGCTTCA
TGAGCATGGCGTCCAACCTAATGAACAATCCCCAAGTTCAGCAGCTTATGTCCGGGATGATTTCTGGCGGCCACAACCCC
CTGGGCACTCCGGGCACCAGCCCCTCGCAGAACGACCTGGCCAGCCTCATCCAGGCGGGCCAGCAGTTCGCTCAGCAGAT
GCAGCAGCAGAACCCAGAGTTGATAGAACAGCTCCGCAGTCAGATCCGAAGTCGGACCCCCAGTGCCAGCAACGACGACC
AGCAGGAATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_synovial_membrane | 16 .39 RPM |
| SRP021940_embryo | 40 .89 RPM |
| SRP021940_cerebellum | 31 .63 RPM |
| SRP021940_testis | 53 .65 RPM |
| SRP021940_placental_villous | 15 .06 RPM |
| SRP021940_articular_cartilage | 14 .17 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000005257 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000004900 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000004937 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000011900 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_723 | 71.04 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ecab_780 | 67.53 | 69.91 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSECAG00000010381 retrocopies