Parental gene: | Sgta, ENSMUSG00000004937 |
| Aliases: | Sgta, 5330427H01Rik, AI194281, D10Ertd190e, Sgt, Stg |
| Description: | small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha [Source:MGI Symbol;Acc:MGI:1098703] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 10:81044074..81060178(-) |
>ENSMUSG00000004937
ATGGACAACAGGAAGCGCCTGGCCTATGCCATCATCCAGTTCCTCCATGGCCAGTTGCGGCACGGTGGGCTCTCGTGTGA
CGCCCAGGAGAGCCTAGAGGTTGCCATCCAGTGTCTGGAGACAGCCTTCGGGGTGACGCTGGAGGACAGTGACCTTGCTC
TCCCCCAGACCCTGCCAGAGATATTTGAAGCAGCCACTTCCAGCAAGCAGGAGATGCCACAGGACCCGCGGGCCCCTGAC
AGGACACCACCCTCTGAAGAGGACTCAGCTGAGGCAGAGCGCCTCAAAACGGAAGGTAATGAGCAGATGAAGCTGGAGAA
CTTCGAGGCGGCTGTGCACCTCTACGGCAAGGCCATTGAGCTCAACCCTGCCAATGCTGTCTACTTCTGTAACAGAGCTG
CGGCCTACAGCAAGCTGGGGAACTACGTGGGGGCCGTGCAGGACTGCGAGCGCGCCATTGGCATCGACCCTGGGTATAGC
AAGGCCTATGGCCGCATGGGCCTTGCACTATCCAGCCTGAACAAGCATGCAGAGGCTGTGGCATACTACAAGAAGGCCCT
GGAGCTGGACCCTGACAACGACACATACAAGTCCAACCTCAAGATTGCAGAGCTGAAGTTACGGGAGGCGCCAAGCCCTA
CGGGCGGCGTGGGCAGCTTAGACATCGCTGGCCTGCTGAACAACCCACACTTCATCACCATGGCTTCGAGCTTAATGAAC
AGCCCCCAGCTACAGCAGCTCATGTCGGGCATGATCTCCGGAGGCCATAACCCTCTGGGCACGCCAGGCAGCAGTCCGCA
GCAGAGTGACCTGGCCAGCCTCATCCAGGCGGGCCAACAGTTTGCACAGCAGATGCAGCAGCAGAACCCAGAGTTTGTGG
AGCAGATCCGGAGCCAGGTGGTGCGCAGCCGGACACCCAGTGCCAGCCATGAGGAGCAGCAAGAGTGA
ATGGACAACAGGAAGCGCCTGGCCTATGCCATCATCCAGTTCCTCCATGGCCAGTTGCGGCACGGTGGGCTCTCGTGTGA
CGCCCAGGAGAGCCTAGAGGTTGCCATCCAGTGTCTGGAGACAGCCTTCGGGGTGACGCTGGAGGACAGTGACCTTGCTC
TCCCCCAGACCCTGCCAGAGATATTTGAAGCAGCCACTTCCAGCAAGCAGGAGATGCCACAGGACCCGCGGGCCCCTGAC
AGGACACCACCCTCTGAAGAGGACTCAGCTGAGGCAGAGCGCCTCAAAACGGAAGGTAATGAGCAGATGAAGCTGGAGAA
CTTCGAGGCGGCTGTGCACCTCTACGGCAAGGCCATTGAGCTCAACCCTGCCAATGCTGTCTACTTCTGTAACAGAGCTG
CGGCCTACAGCAAGCTGGGGAACTACGTGGGGGCCGTGCAGGACTGCGAGCGCGCCATTGGCATCGACCCTGGGTATAGC
AAGGCCTATGGCCGCATGGGCCTTGCACTATCCAGCCTGAACAAGCATGCAGAGGCTGTGGCATACTACAAGAAGGCCCT
GGAGCTGGACCCTGACAACGACACATACAAGTCCAACCTCAAGATTGCAGAGCTGAAGTTACGGGAGGCGCCAAGCCCTA
CGGGCGGCGTGGGCAGCTTAGACATCGCTGGCCTGCTGAACAACCCACACTTCATCACCATGGCTTCGAGCTTAATGAAC
AGCCCCCAGCTACAGCAGCTCATGTCGGGCATGATCTCCGGAGGCCATAACCCTCTGGGCACGCCAGGCAGCAGTCCGCA
GCAGAGTGACCTGGCCAGCCTCATCCAGGCGGGCCAACAGTTTGCACAGCAGATGCAGCAGCAGAACCCAGAGTTTGTGG
AGCAGATCCGGAGCCAGGTGGTGCGCAGCCGGACACCCAGTGCCAGCCATGAGGAGCAGCAAGAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 79 .13 RPM |
| SRP007412_cerebellum | 97 .87 RPM |
| SRP007412_heart | 77 .55 RPM |
| SRP007412_kidney | 76 .42 RPM |
| SRP007412_liver | 50 .49 RPM |
| SRP007412_testis | 131 .04 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000005257 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000010381 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000004900 | ortholog_one2many | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000011900 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_621 | 74.71 | 53.65 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000004937 retrocopies