Parental gene: | TADA3, ENSECAG00000018186 |
| Aliases: | None |
| Description: | transcriptional adaptor 3 [Source:HGNC Symbol;Acc:19422] |
| Organism: | Horse (Equus caballus) |
| Coordinates: | 16:7036611..7045204(+) |
>ENSECAG00000018186
ATGAGTGAGCTGAAGGACTGCCCCTTGCAGTTCCACGACTTCAAGTCTGTGGACCACCTGAAGGTCTGTCCCCGTTACAC
GGCAGTGCTGGCCCGCTCTGAGGATGATGGCATCGGCATCGAGGAGCTGGACACTCTGCAGCTGGAGCTGGAGACCCTGC
TTTCCTCTGCCAGCAGGCGCCTGCGAGTGCTCGAGGCTGAAACCCAGATCCTCACTGATTGGCAGGATAAGAAAGGTGAC
CGACGATTCCTGAAGCTTGGTCGAGACCATGAGCTTGGAGCTCCCCCCAAACACGGGAAGCCTAAGAAGCAGAAACTGGA
AGGGAAGGCAGGACATGGGCCAGGCCCTGGCCCCGGACGGCCCAAATCCAAAAACCTGCAGCCCAAGATCCAGGAATATG
AATTCACTGATGACCCAATTGACGTGCCACGGATCCCCAAGAATGACGCCCCTAACAGGTTCTGGGCTTCGGTGGAGCCC
TACTGTGCAGATATCACCAGCGAGGAGGTGCGCACGCTAGAGGAACTGCTGAAGCCCCCAGAAGACGAGGCTGAGCATTA
CAAGATCCCACCCCTGGGGAAGCACTACTCTCAACGCTGGGCACAGGAGGACCTGCTGGAGGAGCAGAAGGACGGGGCCC
GGGCAGCAGCCGTGGCTGACAAGAAGAAAGGCCTCATGGGGCCACTGACTGAACTGGACACTAAAGACGTGGATGCCCTG
CTGAAGAAGTCTGAGGCCCAGCATGAGCAGCCAGAAGATGGGTGCCCCTTTGGTGCTCTGACGCAGCGCCTCCTGCAGGC
CCTGGTGGAGGAAAATATCATTTCCCCAATGGAGGACTCTCCTATTCCCGACATGTCTGGGAAAGAATCGGGGGCTGATG
GCGCAAGCACCTCTCCCCGCAATCAGAATAAGCCCTTCAGTGTGCCACATACCAAGTCCCTGGAAAGCCGCATCAAGGAG
GAGCTCATTGCCCAGGGCCTCCTGGAGTCAGAGGAGCGCCCTGCAGAGGACTCGGAGGATGAGGTCCTCGCGGAGCTGCG
CAAACGGCAGGCTGAGTTGAAGGCACTTAGTGCCCACAACCGCACCAAGAAGCATGACCTGCTGAGGCTGGCAAAGGAGG
AGGTGAGCCGCCAGGAGCTGAGGCAGCGGGTCCGCATGGCAGACAATGAGGTCATGGATGCCTTCCGCAAGATCATGGCT
GCCCGGCAGAAGAAGCGGACCCCCACCAAGAAGGAGAAGGACCAGGCCTGGAAGACTCTAAAGGAGCGCGAGAGCATCCT
AAAGCTGCTGGATGGGTAG
ATGAGTGAGCTGAAGGACTGCCCCTTGCAGTTCCACGACTTCAAGTCTGTGGACCACCTGAAGGTCTGTCCCCGTTACAC
GGCAGTGCTGGCCCGCTCTGAGGATGATGGCATCGGCATCGAGGAGCTGGACACTCTGCAGCTGGAGCTGGAGACCCTGC
TTTCCTCTGCCAGCAGGCGCCTGCGAGTGCTCGAGGCTGAAACCCAGATCCTCACTGATTGGCAGGATAAGAAAGGTGAC
CGACGATTCCTGAAGCTTGGTCGAGACCATGAGCTTGGAGCTCCCCCCAAACACGGGAAGCCTAAGAAGCAGAAACTGGA
AGGGAAGGCAGGACATGGGCCAGGCCCTGGCCCCGGACGGCCCAAATCCAAAAACCTGCAGCCCAAGATCCAGGAATATG
AATTCACTGATGACCCAATTGACGTGCCACGGATCCCCAAGAATGACGCCCCTAACAGGTTCTGGGCTTCGGTGGAGCCC
TACTGTGCAGATATCACCAGCGAGGAGGTGCGCACGCTAGAGGAACTGCTGAAGCCCCCAGAAGACGAGGCTGAGCATTA
CAAGATCCCACCCCTGGGGAAGCACTACTCTCAACGCTGGGCACAGGAGGACCTGCTGGAGGAGCAGAAGGACGGGGCCC
GGGCAGCAGCCGTGGCTGACAAGAAGAAAGGCCTCATGGGGCCACTGACTGAACTGGACACTAAAGACGTGGATGCCCTG
CTGAAGAAGTCTGAGGCCCAGCATGAGCAGCCAGAAGATGGGTGCCCCTTTGGTGCTCTGACGCAGCGCCTCCTGCAGGC
CCTGGTGGAGGAAAATATCATTTCCCCAATGGAGGACTCTCCTATTCCCGACATGTCTGGGAAAGAATCGGGGGCTGATG
GCGCAAGCACCTCTCCCCGCAATCAGAATAAGCCCTTCAGTGTGCCACATACCAAGTCCCTGGAAAGCCGCATCAAGGAG
GAGCTCATTGCCCAGGGCCTCCTGGAGTCAGAGGAGCGCCCTGCAGAGGACTCGGAGGATGAGGTCCTCGCGGAGCTGCG
CAAACGGCAGGCTGAGTTGAAGGCACTTAGTGCCCACAACCGCACCAAGAAGCATGACCTGCTGAGGCTGGCAAAGGAGG
AGGTGAGCCGCCAGGAGCTGAGGCAGCGGGTCCGCATGGCAGACAATGAGGTCATGGATGCCTTCCGCAAGATCATGGCT
GCCCGGCAGAAGAAGCGGACCCCCACCAAGAAGGAGAAGGACCAGGCCTGGAAGACTCTAAAGGAGCGCGAGAGCATCCT
AAAGCTGCTGGATGGGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_synovial_membrane | 44 .86 RPM |
| SRP021940_embryo | 69 .00 RPM |
| SRP021940_cerebellum | 58 .89 RPM |
| SRP021940_testis | 258 .14 RPM |
| SRP021940_placental_villous | 28 .82 RPM |
| SRP021940_articular_cartilage | 22 .55 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000005324 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000048930 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000034225 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000008597 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_601 | 79.73 | 50.93 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSECAG00000018186 retrocopies