Parental gene:

MEMO1, ENSECAG00000019946

Aliases:None
Description:mediator of cell motility 1 [Source:HGNC Symbol;Acc:14014]
Organism:Horse (Equus caballus)
Coordinates:15:64750916..64810664(+)


>ENSECAG00000019946
GGACCGCAGCTGAATGCACAGCTAGAAGGTTGGCTTTCACAAGTACAGTCTACAAAAAGACCTGCTAGAGCCATTATTGC
ACCCCATGCGGGATATACGTACTGTGGGTCTTGTGCTGCTCATGCTTACAAACAAGTGGATCCATCTATTACCCGGAGAA
TTTTCATCCTTGGGCCTTCTCATCATGTGCCCCTCTCTCGATGTGCACTTTCCAGTGTGGATATATATAGGACACCTCTC
TATGACCTTCGTATTGACCAAAAGATTTACGGAGAACTATGGAAGACAGGAATGTTTGAACGCATGTCTCTGCAGACAGA
TGAAGATGAACACAGTATTGAAATGCATTTGCCTTATACAGCTAAAGCCATGGAAAGCCATAAGGATGAGTTTACCATTA
TTCCTGTACTGGTTGGAGCTCTGAGTGAGTCAAAAGAACAGGAATTCGGAAAACTCTTCAGTAAATATCTAGCGGATCCT
AGTAATCTCTTTGTGGTTTCTTCTGATTTCTGCCATTGGGGTCAAAGGTTCCGTTACAGTTACTATGATGAATCCCAGGG
GGAGATTTATAGATCCATTGAACATCTAGATAAAATGGGTATGAGTATTATAGAACAATTAGACCCTGTATCTTTTAGCA
ATTACTTGAAGAAATATCATAATACTATATGTGGAAGACATCCCATTGGGGTGTTATTAAATGCTATCACAGAGCTCCAG
AAGAATGGAATGAATATGAGCTTTTCCTTTTTGAATTATGCCCAGTCAAGCCAGTGTAGAAACTGGCAAGACAGTTCAGT
GAGTTATGCAGCTGGAGCACTCACAGTCCACTGA

Library Parental gene expression (RPM)
SRP021940_synovial_membrane 9 .03 RPM
SRP021940_embryo 10 .89 RPM
SRP021940_cerebellum 7 .48 RPM
SRP021940_testis 128 .97 RPM
SRP021940_placental_villous 11 .21 RPM
SRP021940_articular_cartilage 1 .95 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000007771 ortholog_one2one 1 retrogene
retro_amel_1500,
Echinops telfairi ENSETEG00000007994 ortholog_one2one 1 retrogene
retro_etel_561,
Felis catus ENSFCAG00000001385 ortholog_one2one 1 retrogene
retro_fcat_642,
Homo sapiens ENSG00000162959 ortholog_one2one 2 retrogenes
retro_hsap_2507, retro_hsap_3522,
Myotis lucifugus ENSMLUG00000016108 ortholog_one2one 1 retrogene
retro_mluc_1923,
Mus musculus ENSMUSG00000058704 ortholog_one2one 1 retrogene
retro_mmus_834,
Nomascus leucogenys ENSNLEG00000015577 ortholog_one2one 1 retrogene
retro_nleu_488,
Oryctolagus cuniculus ENSOCUG00000005878 possible_ortholog 3 retrogenes
retro_ocun_1441, retro_ocun_1663, retro_ocun_928,
Otolemur garnettii ENSOGAG00000010975 ortholog_one2one 3 retrogenes
retro_ogar_1860, retro_ogar_2049, retro_ogar_3050,
Pongo abelii ENSPPYG00000012511 ortholog_one2one 1 retrogene
retro_pabe_2910,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_401 61.35 57.04
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Download FASTA sequences of all ENSECAG00000019946 retrocopies