Parental gene:

MEMO1, ENSPPYG00000012511

Aliases:None
Description:mediator of cell motility 1 [Source:HGNC Symbol;Acc:14014]
Organism:Orangutan (Pongo abelii)
Coordinates:2a:80062907..80139375(+)


>ENSPPYG00000012511
GGACCGCAGCTGAATGCACAGCTAGAAGGTTGGCTTTCACAAGTACAGTCTACAAAAAGACCTGCTAGAGCCATTATTGC
CCCCCATGCAGGATATACGTACTGTGGGTCTTGTGCCGCCCATGCTTATAAACAAGTGGATCCGTCTATTACCCGGAGAA
TTTTCATCCTTGGGCCTTCTCATCATGTGCCCCTCTCTCGATGTGCACTTTCCAGTGTGGATATATATAGGACACCTCTG
TATGACCTTCGTATTGACCAAAAGATTTACGGAGAACTATGGAAGACAGGAATGTTTGAACGCATGTCTCTGCAGACAGA
TGAAGATGAACACAGTATTGAAATGCATTTGCCTTATACAGCTAAAGCCATGGAAAGCCATAAGGATGAGTTTACCATTA
TTCCTGTACTGGTTGGAGCTCTGAGTGAGTCAAAAGAACAGGAATTCGGAAAACTCTTCAGTAAATATCTAGCGGATCCT
AGTAATCTCTTTGTGGTTTCTTCTGATTTCTGCCATTGGGGTCAAAGGTTCCGTTACAGTTACTATGATGAATCCCAGGG
GGAGATTTATAGATCCATTGAACATCTAGATAAAATGGGTATGAGTATTATAGAACAATTAGACCCTGTATCTTTTAGCA
ATTACTTGAAGAAATACCATAATACTATATGTGGAAGACATCCCATTGGGGTGTTATTAAATGCTATCACAGAGCTCCAG
AAGAATGGAATGAATATGAGTTTTTCGTTTTTGAATTATGCCCAGTCAAGCCAGTGTAGAAACTGGCAAGACAGTTCAGT
GAGTTATGCAGCTGGAGCACTCACGGTCCAC

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 10 .51 RPM
SRP007412_cerebellum 7 .05 RPM
SRP007412_heart 8 .04 RPM
SRP007412_kidney 10 .14 RPM
SRP007412_liver 8 .11 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000007771 ortholog_one2one 1 retrogene
retro_amel_1500,
Equus caballus ENSECAG00000019946 ortholog_one2one 1 retrogene
retro_ecab_401,
Echinops telfairi ENSETEG00000007994 ortholog_one2one 1 retrogene
retro_etel_561,
Felis catus ENSFCAG00000001385 ortholog_one2one 1 retrogene
retro_fcat_642,
Homo sapiens ENSG00000162959 ortholog_one2one 2 retrogenes
retro_hsap_2507, retro_hsap_3522,
Myotis lucifugus ENSMLUG00000016108 ortholog_one2one 1 retrogene
retro_mluc_1923,
Mus musculus ENSMUSG00000058704 ortholog_one2one 1 retrogene
retro_mmus_834,
Nomascus leucogenys ENSNLEG00000015577 ortholog_one2one 1 retrogene
retro_nleu_488,
Oryctolagus cuniculus ENSOCUG00000005878 possible_ortholog 3 retrogenes
retro_ocun_1441, retro_ocun_1663, retro_ocun_928,
Otolemur garnettii ENSOGAG00000010975 ortholog_one2one 3 retrogenes
retro_ogar_1860, retro_ogar_2049, retro_ogar_3050,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_2910 86.21 62.45
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSPPYG00000012511 retrocopies