Parental gene:

GM2A, ENSECAG00000020587

Aliases:None
Description:ganglioside GM2 activator [Source:RefSeq peptide;Acc:NP_001075381]
Organism:Horse (Equus caballus)
Coordinates:14:26875000..26886359(-)


>ENSECAG00000020587
ATGAGACCCTCGATGCAGGCTCCGTTCCTGATCGCCCTGGGCTTGCTTCTTGCCGGCCCTGCTGCTCCTGTAAGCGTCCT
CTCAGAACGGCTCCGTAGCTTTTCCTGGGATAACTGTGATGAGGGGAAGGACCCTATGGTGCTCAAAAGCCTGACTCTGG
AACCTGACCCCATTGCCGTTCCTGGGAACGTGACTGTCAGTGCCGAGGTGAAGACCACTGTCGCCCTCTCTGCTCCTCAG
AAGGTGGAACTAACGGTGGAGAAGGAAGTGGCTGGCGTATGGGTCAAAATTCCATGTGTGGATCAGATCGGTAGCTGTAC
TTTTGACAATGCCTGTGATATACTAGACGCTTTGACTCCCCCTGGGCAGCCCTGCCCAGAGCCCCTGCACACCTTTGGGC
TTCCCTGCCACTGTCCCTTCAAAGAAGGCACCTACTCACTGCCCAAGAGTACTTTCCCCTTGCCTGACCTGGAGCTGCCC
AGCTGGCTCAGCAACGGGAACTACCGTGTCCAGAGCATCCTGAGCAGCGGTGGGAAACGTCTGGGCTGTGTCAAGATCAC
TGCCTCTCTAAAGGCCAAATGA

Library Parental gene expression (RPM)
SRP021940_synovial_membrane 27 .89 RPM
SRP021940_embryo 11 .15 RPM
SRP021940_cerebellum 23 .47 RPM
SRP021940_testis 48 .21 RPM
SRP021940_placental_villous 3507 .01 RPM
SRP021940_articular_cartilage 11 .16 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000196743 ortholog_one2one 2 retrogenes
retro_hsap_264, retro_hsap_2715,
Gorilla gorilla ENSGGOG00000015302 ortholog_one2one 2 retrogenes
retro_ggor_1891, retro_ggor_313,
Macropus eugenii ENSMEUG00000010421 ortholog_one2one 1 retrogene
retro_meug_1818,
Microcebus murinus ENSMICG00000000690 ortholog_one2one 1 retrogene
retro_mmur_518,
Myotis lucifugus ENSMLUG00000003215 ortholog_one2one 1 retrogene
retro_mluc_920,
Macaca mulatta ENSMMUG00000022869 ortholog_one2one 1 retrogene
retro_mmul_454,
Nomascus leucogenys ENSNLEG00000010966 ortholog_one2one 1 retrogene
retro_nleu_866,
Oryctolagus cuniculus ENSOCUG00000015837 ortholog_one2many 1 retrogene
retro_ocun_704,
Ochotona princeps ENSOPRG00000006171 ortholog_one2one 1 retrogene
retro_opri_1169,
Pongo abelii ENSPPYG00000015962 ortholog_one2one 1 retrogene
retro_pabe_403,
Pan troglodytes ENSPTRG00000017431 ortholog_one2one 2 retrogenes
retro_ptro_1834, retro_ptro_221,
Ictidomys tridecemlineatus ENSSTOG00000028500 ortholog_one2one 1 retrogene
retro_itri_759,
Tursiops truncatus ENSTTRG00000000503 ortholog_one2one 1 retrogene
retro_ttru_488,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_510 77.04 99.48
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Download FASTA sequences of all ENSECAG00000020587 retrocopies