Parental gene: | TKTL1, ENSECAG00000021992 |
| Aliases: | None |
| Description: | transketolase-like 1 [Source:HGNC Symbol;Acc:11835] |
| Organism: | Horse (Equus caballus) |
| Coordinates: | X:122595266..122626085(+) |
>ENSECAG00000021992
ATGGCTGAGGAAACCAAGCCTGACGCGAAGACCGTGCAGGTGCTCCAGGACATGGCCAATCGCCTGCGCATCCAGTCTAT
CAGGGCCGCGTGCGCCTCGAGCTCCGGCCACCCCACATCGTGCAGCAGTGCTGCTGAGATCATGGCCGTGCTGTTCTTCC
ACACCATGAGGTATAAACAGGCGGACCCGGACGACCCGGACAATGACCGATTCGTCCTCTCCAAGCGGGGCTGGCCCCTT
CGCGCGCTGCGCTGCAGGTGGACCCAGCAGGCCACCATTAGCAGATCCGATTTGCTGGGCTCGAGGAAAATTGGGTTTGA
TTTGGAGGGACATCCCACCCCTAGACTGTCGTTTGTTGATGTGGCAACCGGATGGCTCGGGCAAGGACTGGGGGCCGCGT
GCGGGATGGCGTATACTGGCAAGTACTTTGATAAGGCCAGCTACCGGGTGTTCTGCCTCTTGGGAGATGGCGAGTTCTCG
GAAGGCTCCGTCTGGGAGGCGTTGGCCTTCGCTTCCCACTACAGTCTGGACAATCTTGTGGCCGTCTTCGACGTGAACCG
CCTGGGCCACAGTGGCACCTTGCCCCTTGAGAACTGCATAGACGTCTATCAGAAGCGCTGCGAAGCCTTTGGGTGGAATA
CTTATGTGGTAGATGGCCGTGATGTGGAGGCGCTGTGCCAAGTGTTCTGGCAGGCAGCTCAGGTGAAGAACAAGCCCACT
GCTGTGGTTGCCAAGACCTTCAAGGGCCGGGGTATTCCAAACGTTGAGGATGCAGAAAATTGGCATGGAAAGCCAATGCC
AAAAGAAAGAGCAGATGCAATTATCAAACTAATTGAGAGCCAGATTGAGACCAACCAGAATCTCGAACCAAAACCGCCTA
TTGAAGACTCGCCTCAAATCACCATCACGGATATAGAAATGACCTCTCCACCTGCTTACAAAGATGGTGACAAGATAGCT
ACTCGGAAAGCGTGTGGTTTGGCTCTGGCTAAGCTGGGCCATGCAAATAATAGAGTCATTGTGCTGGATGGTGACACCAA
GAACTCCACCTTCTCTGAGATATTCAAGAAGGAGCACCCCGAGCGGTTCATCGAGTGTTTCATTGCTGAGCAAAACATGG
TGAGCGTGGCACTGGGATGCGCCATTCGTGATCGGACCATTGCTTTTGTTAGCACCTTCGCTGCCTTTTTGACCCGAGCA
TTTGATCAGATCCGAGTGGGAGCCATCTCTCAAAGCAACATTAACCTTATTGGGTCCCACTGCGGGGTATCCGTAGGTGA
AGATGGCCCCTCCCAGATGGCCCTGGAGGATCTGGCCATGTTCCGAGCTGTTCCCAACTGCACTATTTTCTATCCAAGTG
ACGCCATCTCAACGGAGCATGCTGTTTTCCTGGCGGCCAATACCAAGGGGATGTGCTACATTCGGACCAGCCGCCCGGAG
ACCTCAGTCATTTATACTGCGCAAGAACGCTTTGAGATTGGACAGGCCAAGGTCGTCCGCCACAGTGTCAACGACAAGGT
CACTGTTATTGGAGCTGGAGTTACTCTTCATGAAGCCTTAGCAGCTGCTGACGATCTTTCCAAGCAAGATATTTCTGTCC
GCGTCATCGACCTGTTTACCATTAAACCCCTGGATGCTGCCACCATCATCTCCAATGCGAAAGCCACAGGTGGCCGGATT
ATCACAGTGGAGGATCACTACCCAGAAGGTGGCATCGGGGAGGCTGTCTGTGCTGCTGTCTCCATGGAACCTGACATCTT
AGTCCATCAGCTGGCAGCGCCAGGAGTGCCTCAGAGTGGGAAGCCAAGTGAGCTGCTGGATATGTTTGGAGTCAGTGCCA
GACATATCATAGTGGCTGTGAAATGTATGTTAATGAACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_articular_cartilage | 0 .00 RPM |
| SRP021940_cerebellum | 0 .68 RPM |
| SRP021940_embryo | 0 .03 RPM |
| SRP021940_placental_villous | 0 .19 RPM |
| SRP021940_synovial_membrane | 0 .00 RPM |
| SRP021940_testis | 206 .60 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000018441 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000011392 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000005145 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000020870 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000005014 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_6 | 80.03 | 100.00 | Please wait, loading  |
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Download FASTA sequences of all ENSECAG00000021992 retrocopies