Parental gene:

TKTL1, ENSFCAG00000011392

Aliases:None
Description:transketolase-like 1 [Source:HGNC Symbol;Acc:11835]
Organism:Cat (Felis catus)
Coordinates:X:124962705..124984688(+)


>ENSFCAG00000011392
GCTGATAGTCACCAGATGAACTTGCCCCAAGTATACAGTCTGAGAAGCCTGTGTAATAAAAGGCCTCCTTGTGCACCGGG
TCCCTGCCATCCCACGTCCTCCAGTAGTGCTGCTGAGGTCATGGCCGTGCTGTTCTTTCACATCATGAGGTATAAACAGG
AGGACCCGGAGAACCCAGATAATGACCGTTTCATCCTCTCCAAGGGTTCTTCTTTGTCTGCCTCTTCTGCCACCTGGGTA
GAGGTGGGCAACATTAGTGGATCTATGTTGAGCTCAAGGAAAATTGAGTTGAACTTGGAGGGATATTCCACCCGAAGGCT
GTCATTTGTTGATGTGGCAACCGGATGGTTTGGGCAAGGACTGGGGGCTGCTTGTGGGATGGCATATACTGGCAAGTACT
TTGACAAAGCCAGCTACCGGGTGTTCTGCCTCTTGGGAGATGGTGAGTCCTCAGAAGGCTCCGTCTGGGAAGCATTGGCT
TTTGCTTCCCACTACAATCTGGATAACCTTGTGGCCATCTTCGACGTGAACCGCCTGGGCCACAGTGGTGCCTTGCCCAT
TGAGCACTGCGTGGATGTCTATCAGAAGCGCTGCGAAGCCTTTGGGTGGAATACTTACGTGGTGGACGGACGCGATGTGG
AGGTACTGTGCCAGGTGTTCTTGCAGGCAAGTCAAGTAAAGAACAAGCCCACTGCTGTAGTTGCCAAAACCTTCAAGGGC
CGGGGCACTCCAAGTATTGAAGATGCAGAAAATTGGCATGGAAAGCCAATGCCAAGAGAGCGAGCTGATGCGATTATCAA
ACTAATTGAGAGCCAGATACAGACCAACGAGAATCTTGACCCAAAACCCCCTATTGAAGACTCACCTCAAATCAACATCC
TAGATATAGAAATGATTTCTCTACCTGCTTACACAGTTGATGAGAAGGTAGCTACTCGGAAAGCATGTGGTTTGGCGCTG
GCTAAACTGGGCCACGCAAACGATAGAGTCATTGTGCTGGATGGTGACACCAAGAACTCCACGTTCGCAGACATATTCAA
GAAGGAGCACCCTGAGCGCTTCATTGAATGTTTTATTGCTGAGCAAAACATGGTGAGCGTGGCACTGGGATGTGCCACCC
GTGGTCGGACTGTTGCTTTTGTCAGCACCTTCGCTGCCTTTTTGACCCGAGCATTTGATCAAATCCGGATGGGAGCTGTT
TCTCAAACCAACATCAACCTTATTGGGTCCCACTGTGGAATATCTGTTGGTGAAGATGGCGCCTCCCAGATGGCCCTGGA
GGATCTGGCCATGTTCCGAGCTGTTCCCAACTGCACTATTTTCTATCCAAGTGATGCCGTCTCAACAGAACATGCTGTTT
TCCTGGCAGCCAATAGCACGGGGATGTGCTATATTCGGACCAGCCGACCAGAAACTGCAGTTATTTACACCCAACAAGAA
AGCTTTGAGATCGGACGGGCCAAGGTCCTCCGCCACAGTGTCAATGACAAAGTCACGGTTATTGGAGCTGGAGTTACACT
GCATGAAGCCTTAGCGGCTGCCGAAGATCTTTCCAAGCAAGATATTTCCATCCGTGTCATTGACCTGTTTACCATTAAAC
CGCTGGATACTGTCACCATCATGTCCAGTGCAAAAGCCACAGGTGGCCGTATTATCACAGTGGAGGATCACTACTCAGAA
GGTGGCATCGGGGAGGCCGTCGCTGCAGCTGTCTCTACGGAGCCTGACATCTTGGTCCGTCAGCTGGCAGTGGCAGGAAT
CCCTCGGAGTGGGAAGCCCAGTGAGCTGCTAGATATGTTTGGAATCAGTGCGAAACACATCATAGTGGCTGTGAAATGTA
TGTTGATGAACTAA

Library Parental gene expression (RPM)
SRP017611_liver 0 .20 RPM
SRP017611_kidney 0 .00 RPM
SRP017611_brain 1 .03 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000018441 ortholog_one2one 1 retrogene
retro_amel_119,
Equus caballus ENSECAG00000021992 ortholog_one2one 1 retrogene
retro_ecab_6,
Loxodonta africana ENSLAFG00000005145 ortholog_one2one 1 retrogene
retro_lafr_6,
Pongo abelii ENSPPYG00000020870 ortholog_one2one 1 retrogene
retro_pabe_205,
Ictidomys tridecemlineatus ENSSTOG00000005014 ortholog_one2one 1 retrogene
retro_itri_30,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_84 78.60 96.76
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSFCAG00000011392 retrocopies