Parental gene:

ENSECAG00000023794

Aliases:None
Description:None
Organism:Horse (Equus caballus)
Coordinates:10:22561094..22662066(+)


>ENSECAG00000023794
CAGGTGCTGTTGACTTTCAGGGACGTGGCCATAGAGTTCTCGCCAGAGGAGTGGGAATGCCTGGACCCCGCTCAGAGGGC
CTTGTACAGGGACGTGATGCTGGAGAACTACAGGAACCTGCTCTCCCTGGCAGCAGTTTCCCCAAAACCTTACTTAAGAA
CATGTGGCCAGAACCTGCAGGCCCAGGTTCAAATCTTGGCTCTCAAATTTACTTTCTGTGTGAATTATGAAAAGCCTTAC
AAATGCAATGCTTGTGAGAAGGCTTTTAGAGAAAGCTCAAACCTTGCTAGTCACCAGAGAATTCTTTCTGGGCAGAGACC
TTACAAATGTAATGAGTGTGGCAAAGCATTTACCCAATTTGCAAACCTTTCTAGACATCTGAGACTCCATACCAGAGAGA
AACCATATAAATGTGATATATGTGGCAAGGGCTGTAGTCAAAATGCAAATCTTGCAAGTCATCAGAAAATCCATACTGGG
GAGAGACCTTACAAATGTAATGAGTGTGGCAAAGCCTTGTCCGAGCGTTCAAGCCTTACTCAGCATAAGAGAATCCATAC
TGGAGAGAAACCTTATAAATGTAATGAGTGTGGGAAGACTTTCAGAGGAAGCTTGAATCTCACTAATCATCAGAGAATTC
ATTCTGGGCAGAGGCCTTACAAATGTAGTGAGTGTGACAAATCCTTCAACCGCATCTCACACCTCACTAGACACCAGAGA
ATCCATACTGGAGAGAAACCTTATAAATGTAACATGTGTGGCAAGGTCTGTAGTCAACATTCAAATCTTCTAAGTCATCA
GAGAATTCATACAGGAGAGAAACCTTATAAATGTAATGAGTGTGGGAAGACTTTCAGAGGAAGCTCGAATCTCACTAATC
ATCAGAGAATTCATTCTGGGCAGAGGCCTTACAAATGTAGTGAGTGTGACAAATCCTTCAGCCGCATCTCACACCTCACT
AGACACCAGAGAATCCATACTGGAGAGAAACCTTATAAATGTAACGTGTGTGGCAAGGTCTGTAGTCAACATTCAAATCT
TACAATTCATCAGAGAACTCATACAGGAGAGAAACCTTATAAATGTAATGAGTGTGGCAAAGCCTTTATGGAGCGTTCAA
GCCTTACTCAACATACGAGAATCCATAGTGGAGAGAAGCCTTACTCGTGTAAAGAATGTGGCAAAGCCTTTAACCAGTCC
TCTAACCTTGTCATACATCAAATAATTCATACTGGAGAGAAGCCATACAAATGCAATGTGTGTGGCAAAGCCTTTAATGT
GTGTTCAAGCCTTACCCGTCATCAGACAATCCATACTGGGGAGAAGCCTTACAAATGTACTGTATGTCACCAGGTTTTTA
TGCATCCTGCATTGCTCACAGAACACCAGAAAACACGCGTTAGAGAAAAACCTTACAAGTGTAACGAGTGTGGGAAGGCT
TTTAGCCACTGCTCAACCTTAGCTAATCACCAAAGAATTCATTCTGATGAGAGACCTTACAAATGTAATGAGTGTGGCAG
AGCCTTTAACAGGTTCTCAAACCTCACAAGGCATCAGAGAATTCATACTGGGGAGAAACCATATAAATGTAATGTGTGTG
GTAAGGATTTTATGATACGTTCACACCTTTGGAGTCATGAGCGAATTCATACTGGAGAGAAACCTTACAAATGTAATGAG
TGTGGCAAAGCCTTTTCTGAGCGTTCAAATCTTGCTCAACACAAGAGAATCCATACTGGAGAGAAACCTTACAAATGTAA
CGAATGTGGTAAGGATTTTACCACACGTTCACACCTTTGGGGTCATGAGAGGATTCATACTGGAGAGAAGCCTTACAAAT
GTAATGAGTGTGGCAAAGCCTTCACCGGGAGTTCAAATCTTACTCAACATAAGAAAATTCATACTGGAGAGAAACCATAT
AAATGTACTGTATGTGGCAAGGCCTTTAGTCAGAATTCAAGCCTTATAGTTCATCAAAGAATTCATACTGGGGAGAAGCC
TTACAAATGTCATGAATGTGGCAAAGCCTTTAAGCAGTACTCGAGCCTCAATAGACACCAGAATATACATGGAGGAGAAC
AACCAAACACATGTAATCACTGTGGGAAAGCCTTTCATCAATCATCAACTCTAAAAAGACGTACGAAAATCCATACTGAA
GAGAGACCATACAAATGTAAAGAATGTGGGAAAGCCTTCAACCGGTACTCAAACTTCACTATACATCAGAGAATTCATAC
TGGAGAGAAACCTTACAAATGTAAAGAATGTGGCCAAGCCTTCACCTGGTGCTCATCCCTTACTATACATCAGAGAATTC
ACACTGGAGAGAAGCCTTACAAATGTAAAGTATGTTGCAAAGCCTTCAACCAGTACTCAAACCTTACTAAACATCAGAGA
ATTCATACTGGAGAGAAACCTTACAAATGTAAAGAATGTTGCAAAGCCTTCACCTGGTACACATCCCTTACTATACATCA
GAGAATTCACACTGGAGAGAAACCATACAAATGTAAAGAATGCAGCATCTTCAACCAGTACTCATATCTTACTATACATC
AGAGAATTCATACTGGAGAGAAACCTTACAAATGTAAAGAATGTGGCAAAGCCTTTAACAACTGCTCAAATCTTACTCAA
CATTGGAGAGTTCATACTGGAGGGAAACCTTACAAATGTAAAGAATGCGGCAAAGCCTTCAAGCAGTACTCATGCCTTAC
TCGACATCAGAGAATTCATACTGGAGAGAAACCATACAAATGTATAGAATGTGGCAAGGCTTTTAACCAGTGTTCAAACC
TCACACAACATCAGAGACTTCAT

Library Parental gene expression (RPM)
SRP021940_synovial_membrane 2 .33 RPM
SRP021940_embryo 4 .58 RPM
SRP021940_cerebellum 1 .87 RPM
SRP021940_testis 1 .92 RPM
SRP021940_placental_villous 1 .68 RPM
SRP021940_articular_cartilage 2 .30 RPM



Species Parental gene accession Homology type Retrogenes number
Macaca mulatta ENSMMUG00000003688 ortholog_one2one 1 retrogene
Otolemur garnettii ENSOGAG00000005643 ortholog_one2many 1 retrogene
Otolemur garnettii ENSOGAG00000029638 possible_ortholog 2 retrogenes
Pelodiscus sinensis ENSPSIG00000004688 possible_ortholog 1 retrogene
Pelodiscus sinensis ENSPSIG00000008115 possible_ortholog 1 retrogene

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_61 65.12 56.73
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Download FASTA sequences of all ENSECAG00000023794 retrocopies