Parental gene:

MRPL1, ENSECAG00000024511

Aliases:None
Description:mitochondrial ribosomal protein L1 [Source:HGNC Symbol;Acc:14275]
Organism:Horse (Equus caballus)
Coordinates:3:58432908..58491194(-)


>ENSECAG00000024511
ATGGCGGCGGCCGTTAGATGCCTCGGTAGAGTCTTGATAGCTCATCAAAGGCATAGTCTTTCCAAGATGCCTTATCAGAC
ACCTCTTTATCCTTGTTCTGCATATGTTCAGATACCCAATAGACATTTTGCTGCTGCTACAAAGCCTGCAAAGAAAACAA
AAAAAGGTGCCAAACAAAAAACATTGGAAGAGAAAAAAGATGAGATAGAAAAAATAAAGTCATACCCCTTTATGGAAGGC
GAGCCTGAGGATGATGTCTACTTAAAACACTTATATCCAAGGCAGATATATGATGTGGAAAAAGCTATTCACTTACTTAA
GAAATTTCAAATTCTGGACTTTACTAATCCAAAGCAAGGTGTTTATCTTGATTTGACGTTGGATATGGCACTGGGGAAGA
AGAAAAAAGTGGAGCCATTTGCCAGTGTTCTTAGTTTTCCATACCCATTCATTTCAGAAATCAATAAAGTTGCTGTATTT
ACAAGGAATGCATCAGAGATTAAAGTAGCAGAAGAAAATGGAGCTGCCATTGCAGGAGGAACTGATGTGATTCAGAAGAT
TTTGGATGATGAAATTCAATTAGACTTTTATGTAGCTGTTCCAGAAATAATGCCTGAGCTTAATCCATTAAAGAAGAAAC
TGAAAAAAAGATTTCCAAAGCTTGCTCAAAATTCCATTGGCCGTGACATCCCCAAAATGCTTGAATTATTTAAAACTGGA
CATGAAATTAAGGTAGATGAAGAAAGGGAGAACTTTCTCAAGACCAAAATAGCAACACTGGATATGTCAAGTGACCAGAT
AGCTGCCAATCTACAAGCAGTTATCAATGAAGTTTGTAGGCACAGACCGCTGAGTTTGGGATCGTTCGTGGTACGTGCTC
TCCTTCGTAGTTCAACAAGTGAAGGTTTGTTACTAAAGATCGAGCCATTGTTGCCAAAAGAAGCAGAAACCAAAGAAAGT
AAAAAAGAACCTGCCTAA

Library Parental gene expression (RPM)
SRP021940_synovial_membrane 1 .56 RPM
SRP021940_embryo 3 .76 RPM
SRP021940_cerebellum 0 .42 RPM
SRP021940_testis 1 .15 RPM
SRP021940_placental_villous 1 .88 RPM
SRP021940_articular_cartilage 1 .18 RPM



Species Parental gene accession Homology type Retrogenes number
Myotis lucifugus ENSMLUG00000011011 ortholog_one2one 2 retrogenes
retro_mluc_2466, retro_mluc_534,
Pteropus vampyrus ENSPVAG00000002696 ortholog_one2one 2 retrogenes
retro_pvam_67, retro_pvam_913,
Tursiops truncatus ENSTTRG00000011899 ortholog_one2one 1 retrogene
retro_ttru_1405,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_665 67.35 60.00
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Download FASTA sequences of all ENSECAG00000024511 retrocopies