RetrogeneDB ID: | retro_mluc_534 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429767:11566143..11566707(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | MRPL1 | ||
Ensembl ID: | ENSMLUG00000011011 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 74.74 % |
Parental protein coverage: | 58.05 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | MAAAVRCLSRVLIHQRHNLSKMPYQTPLYPCSACVHVPNRHFAAAAAAAARRPEKKTKK-GTKEKASNEK |
MAAA.R.L.RVL..QRH.L.KM.YQTPLYPCSACVHVP.RHF....AAA.R.PEKKTK..G.KEKASNEK | |
Retrocopy | MAAALRSLGRVLRPQRHSLPKMAYQTPLYPCSACVHVPKRHF----AAAVRKPEKKTKR>GAKEKASNEK |
Parental | QDDIEKIKSIPFMEDEPEDDVYLKRLYPRQIYEVEKAIHLLKKFQILDF-THPKQGVYLDLTLDMAQGKK |
QD..EK.KS..FME..PEDDVYLK.LYPRQIYEVEKAIHLLKKFQI.......K....LDLTLDMA.GKK | |
Retrocopy | QDEVEKMKSYQFMESKPEDDVYLKHLYPRQIYEVEKAIHLLKKFQI*TLHIQSKXXXXLDLTLDMALGKK |
Parental | KKVEPFASVVSLPY-PFVSEINKVAVFTGNASEIKIAEEHGAAFAGGTNLIQKI |
KKVEPFASV.SLP...F.SEINKVAVFTG.ASE.KIAE.H.AAFA.GTN.IQKI | |
Retrocopy | KKVEPFASVISLPH<SFLSEINKVAVFTGQASESKIAEKHVAAFAEGTNWIQKI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Equus caballus | ENSECAG00000024511 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000011011 | 2 retrocopies |
retro_mluc_2466, retro_mluc_534 ,
|
Pteropus vampyrus | ENSPVAG00000002696 | 2 retrocopies | |
Tursiops truncatus | ENSTTRG00000011899 | 1 retrocopy |