Parental gene:

C15orf48, ENSEEUG00000003556

Aliases:None
Description:chromosome 15 open reading frame 48 [Source:HGNC Symbol;Acc:29898]
Organism:Hedgehog (Erinaceus europaeus)
Coordinates:GeneScaffold_7025:67378..72412(+)


>ENSEEUG00000003556
ATGAACTTATTCCAGCTCCTGATGAAAAAGAAGGAGCTGATTCCCCTGGTGCTGATCATGACCACCGCTGCAGGGGGAGC
CTCCTCCTTCGCTGTGTATTCCCTGTCAAAGTCCGATGTGATCGATCGAAAAAACAATCCAGAACCATGGGAAAACGTGG
ATCTGAATGTACCTCAGAAGCTCATAACAATTAACCAACAGTGGAAGCCTATTGAGGAATTGCAGAAAGTTCGAAGAGCA
ACCAAATGA

Library Parental gene expression (RPM)
SRP017611_liver 0 .32 RPM
SRP017611_kidney 0 .75 RPM
SRP017611_brain 0 .32 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000031501 ortholog_one2one 2 retrogenes
retro_cfam_1654, retro_cfam_669,
Cavia porcellus ENSCPOG00000020706 ortholog_one2one 1 retrogene
retro_cpor_450,
Macropus eugenii ENSMEUG00000013137 ortholog_one2one 4 retrogenes
retro_meug_1593, retro_meug_2033, retro_meug_278, retro_meug_63,
Monodelphis domestica ENSMODG00000028279 ortholog_one2many 1 retrogene
retro_mdom_225,
Oryctolagus cuniculus ENSOCUG00000029216 ortholog_one2many 1 retrogene
retro_ocun_33,
Rattus norvegicus ENSRNOG00000050251 ortholog_one2one 1 retrogene
retro_rnor_484,
Sarcophilus harrisii ENSSHAG00000006433 ortholog_one2many 3 retrogenes
retro_shar_296, retro_shar_416, retro_shar_744,
Ictidomys tridecemlineatus ENSSTOG00000021929 ortholog_one2one 1 retrogene
retro_itri_1133,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_eeur_594 98.80 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSEEUG00000003556 retrocopies