Parental gene:

PFDN1, ENSEEUG00000005357

Aliases:None
Description:prefoldin subunit 1 [Source:HGNC Symbol;Acc:8866]
Organism:Hedgehog (Erinaceus europaeus)
Coordinates:GeneScaffold_2899:46220..137029(-)


>ENSEEUG00000005357
AAGCTTGCAGACATACAGATTGAACAACTAAACAGAACGAAAAAGCATGCACATCTCACAGATACAGAGATTATGACTTT
GGTAGATGAGACTAACATGTATGAAGGTGTAGGAAGAATGTTTATTCTTCAGTCCAAGGAGGTAATTCACAGTCAGCTGC
TGGAGAAACAGAAAATAGCAGAAGAAAAAATTAAGGAATTGGAACAGAAAAAATCCTACCTGGAGAGGAGTGTGAAGGAA
GCGGAGGACAACATTCGGGAAATGCTGATGGCGCGAAGGGACGATTAG

Library Parental gene expression (RPM)
SRP017611_liver 9 .00 RPM
SRP017611_kidney 21 .00 RPM
SRP017611_brain 11 .28 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000005742 ortholog_one2many 8 retrogenes
retro_cfam_1742, retro_cfam_1893, retro_cfam_1943, retro_cfam_251, retro_cfam_276, retro_cfam_417, retro_cfam_788, retro_cfam_997,
Equus caballus ENSECAG00000011843 possible_ortholog 1 retrogene
retro_ecab_53,
Echinops telfairi ENSETEG00000019281 ortholog_one2one 1 retrogene
retro_etel_1629,
Macropus eugenii ENSMEUG00000002726 ortholog_one2one 3 retrogenes
retro_meug_380, retro_meug_686, retro_meug_801,
Otolemur garnettii ENSOGAG00000003376 possible_ortholog 6 retrogenes
retro_ogar_1025, retro_ogar_1216, retro_ogar_1412, retro_ogar_2217, retro_ogar_3129, retro_ogar_89,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_eeur_537 87.80 85.26
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Download FASTA sequences of all ENSEEUG00000005357 retrocopies