Parental gene: | RPS19, ENSEEUG00000013614 |
| Aliases: | None |
| Description: | ribosomal protein S19 [Source:HGNC Symbol;Acc:10402] |
| Organism: | Hedgehog (Erinaceus europaeus) |
| Coordinates: | GeneScaffold_5377:703..6663(+) |
>ENSEEUG00000013614
ATGCCTGGAGTTACTGTAAAAGACGTGAACCAGCAGGAGTTCGTCCGAGCTCTGGCAGCCTTCCTCAAAAAGTCGGAAAA
GCTGAAGGTCCTGGAATTGTTTGATTTTGTCAAGCTGGTTAAGCATAAAGAGTTCGCTCTCTACGAGGAGAACTGGTTCT
ACACACAAACTGCTTCCACAGCACGGCATCTGTACCTTCGGGGTGGTGCTGGGGTTGGCTCCATGACCAAGATTTATGGA
GGACGGCAGAGAAACGGTGTCATGCCCAGCCACTTCAGCAGAGGCTCCAAGAGTGTGGCCCGCCGAGTCCTCCAAGCCCT
AGAAGGGCTGAAAATGGTGGAAAAGGACCAAGATGGGGGCCGCAAACTGACGCCTCAGGGACAGAGAGATCTGGACAGAA
TTGCCGGGCAGGTGGCAGCTGCCAGCAAGAAGCATTAG
ATGCCTGGAGTTACTGTAAAAGACGTGAACCAGCAGGAGTTCGTCCGAGCTCTGGCAGCCTTCCTCAAAAAGTCGGAAAA
GCTGAAGGTCCTGGAATTGTTTGATTTTGTCAAGCTGGTTAAGCATAAAGAGTTCGCTCTCTACGAGGAGAACTGGTTCT
ACACACAAACTGCTTCCACAGCACGGCATCTGTACCTTCGGGGTGGTGCTGGGGTTGGCTCCATGACCAAGATTTATGGA
GGACGGCAGAGAAACGGTGTCATGCCCAGCCACTTCAGCAGAGGCTCCAAGAGTGTGGCCCGCCGAGTCCTCCAAGCCCT
AGAAGGGCTGAAAATGGTGGAAAAGGACCAAGATGGGGGCCGCAAACTGACGCCTCAGGGACAGAGAGATCTGGACAGAA
TTGCCGGGCAGGTGGCAGCTGCCAGCAAGAAGCATTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 5 .79 RPM |
| SRP017611_kidney | 8 .25 RPM |
| SRP017611_brain | 4 .03 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000011963 | possible_ortholog | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000028485 | possible_ortholog | 10 retrogenes | |
| Callithrix jacchus | ENSCJAG00000020243 | possible_ortholog | 5 retrogenes | |
| Rattus norvegicus | ENSRNOG00000048199 | possible_ortholog | 3 retrogenes | |
| Sus scrofa | ENSSSCG00000003042 | possible_ortholog | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_eeur_252 | 86.00 | 68.97 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_eeur_259 | 82.19 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_eeur_318 | 71.43 | 77.24 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_eeur_385 | 86.21 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSEEUG00000013614 retrocopies