Parental gene: | GGPS1, ENSETEG00000008916 |
| Aliases: | None |
| Description: | geranylgeranyl diphosphate synthase 1 [Source:HGNC Symbol;Acc:4249] |
| Organism: | Lesser hedgehog tenrec (Echinops telfairi) |
| Coordinates: | GeneScaffold_2584:9985..52835(+) |
>ENSETEG00000008916
ATGGAGATGGCTCAAGAAACAGTCCAAAGAATTCTTCTAGAACCCTACAAGTACTTGCTTCAATTACCAGGTAAACAAAT
AAGAACCAAGCTTTCACAAGCTTTTAATCATTGGCTGAAAGTTCCAGAAGACAAACTACAGGTTATCATTGAAGTAACAG
AAATGTTACATAATGCCAGTTTACTTATTGATGATATCGAAGACAACTCTAAACTTCGACGTGGCTTTCCAGTGGCTCAT
AGCATCTATGGGATTCCATCTGTCATCAATTCTGCTAATTATGTATATTTTCTAGGTTTAGAAAAAGTCTTGACCCTTGA
TCACCCAGATGCAGTGAAACTTTTTACTCGCCAACTTTTAGAACTCCATCAGGGACAAGGCCTAGATATATACTGGAGGG
ATAATTACACTTGTCCCACTGAAGAAGACTATAAAGCTATGGTCCTTCAAAAGACTGGTGGACTGTTTGGATTAGCTGTA
GGTCTCATGCAATTGTTTTCTGATTACAAAGAAGATTTAAAGCCTCTACTTAATACACTTGGGCTCTTTTTCCAAATTAG
GGATGACTATGCTAATCTACACTCCAACGAATATAGTGAAAACAAAAGCTTTTGTGAAGATCTAACTGAAGGAAAGTTCT
CATTTCCCACTATTCATGCTATTCGGTCAAGGCCTGAGAGCACCCAGGTGCAGAATATCTTGCGCCAGAGAACCGAAAAC
GTAGATGTTAAAAAATACTGTGTACATTATCTTGAGAATGTAGGTTCTTTTGAATACACTCAGAATACTCTGAAAGAGCT
TGAATCTAAAGCTTATAAACAAATTGATGCACGAGGTGGGAACCCTGAACTAACAATGCTAATAAAACATTTAAGTAAAA
TGTTCAGAGAAAAAAATGAATGA
ATGGAGATGGCTCAAGAAACAGTCCAAAGAATTCTTCTAGAACCCTACAAGTACTTGCTTCAATTACCAGGTAAACAAAT
AAGAACCAAGCTTTCACAAGCTTTTAATCATTGGCTGAAAGTTCCAGAAGACAAACTACAGGTTATCATTGAAGTAACAG
AAATGTTACATAATGCCAGTTTACTTATTGATGATATCGAAGACAACTCTAAACTTCGACGTGGCTTTCCAGTGGCTCAT
AGCATCTATGGGATTCCATCTGTCATCAATTCTGCTAATTATGTATATTTTCTAGGTTTAGAAAAAGTCTTGACCCTTGA
TCACCCAGATGCAGTGAAACTTTTTACTCGCCAACTTTTAGAACTCCATCAGGGACAAGGCCTAGATATATACTGGAGGG
ATAATTACACTTGTCCCACTGAAGAAGACTATAAAGCTATGGTCCTTCAAAAGACTGGTGGACTGTTTGGATTAGCTGTA
GGTCTCATGCAATTGTTTTCTGATTACAAAGAAGATTTAAAGCCTCTACTTAATACACTTGGGCTCTTTTTCCAAATTAG
GGATGACTATGCTAATCTACACTCCAACGAATATAGTGAAAACAAAAGCTTTTGTGAAGATCTAACTGAAGGAAAGTTCT
CATTTCCCACTATTCATGCTATTCGGTCAAGGCCTGAGAGCACCCAGGTGCAGAATATCTTGCGCCAGAGAACCGAAAAC
GTAGATGTTAAAAAATACTGTGTACATTATCTTGAGAATGTAGGTTCTTTTGAATACACTCAGAATACTCTGAAAGAGCT
TGAATCTAAAGCTTATAAACAAATTGATGCACGAGGTGGGAACCCTGAACTAACAATGCTAATAAAACATTTAAGTAAAA
TGTTCAGAGAAAAAAATGAATGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000011303 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000016813 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000021302 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000004263 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_etel_1265 | 65.68 | 55.33 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSETEG00000008916 retrocopies