Parental gene: | Ggps1, ENSMUSG00000021302 |
| Aliases: | Ggps1, 1810026C22Rik, 9530089B04Rik, AI843169, C79210 |
| Description: | geranylgeranyl diphosphate synthase 1 [Source:MGI Symbol;Acc:MGI:1341724] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 13:14052448..14063401(-) |
>ENSMUSG00000021302
ATGGAGAAAACTAAAGAGAAAGCTGAGAGGATTCTTCTAGAGCCCTATAGGTACTTACTTCAGTTACCAGGTAAACAGGT
GAGAAGCAAACTTTCACAGGCATTTAATCACTGGCTGAAAGTTCCAGAAGACAAGCTACAGATTATCATTGAAGTGACTG
AAATGTTGCATAATGCCAGTTTACTCATTGATGATATTGAAGACAGTTCAAAGCTCCGACGTGGTTTCCCAGTGGCTCAC
AGCATCTATGGTGTCCCATCTGTCATTAATTCTGCCAATTACGTCTACTTCCTTGGACTGGAAAAAGTCTTAACCCTTGA
TCACCCGGATGCGGTGAAGCTTTTCACACGCCAGCTTCTGGAACTTCATCAGGGACAAGGCCTCGATATTTACTGGAGGG
ACACCTACACTTGTCCAACTGAAGAAGAATATAAAGCCATGGTGTTGCAGAAGACAGGTGGTTTGTTTGGATTAGCAGTA
GGTCTTATGCAGCTGTTCTCTGATTACAAAGAAGATCTAAAGCCACTGCTTGACACACTTGGGCTCTTTTTCCAGATTAG
AGATGATTATGCCAATCTACACTCCAAAGAATACAGTGAAAACAAAAGTTTCTGTGAAGACTTGACAGAAGGGAAGTTCT
CATTCCCCACTATCCATGCCATTTGGTCAAGGCCAGAAAGCACCCAGGTACAGAACATCCTGCGCCAGAGAACAGAGAAT
ATAGATATTAAAAAGTATTGTGTGCAGTACCTGGAGGATGTAGGTTCTTTTGCATACACTCGACACACTCTTAGAGAGCT
TGAAGCTAAAGCCTACAAACAAATTGAGGCCTGTGGTGGGAACCCTTCACTAGTGGCTTTAGTCAAGCACTTAAGTAAGA
TGTTCACAGAAGAAAATAAATAA
ATGGAGAAAACTAAAGAGAAAGCTGAGAGGATTCTTCTAGAGCCCTATAGGTACTTACTTCAGTTACCAGGTAAACAGGT
GAGAAGCAAACTTTCACAGGCATTTAATCACTGGCTGAAAGTTCCAGAAGACAAGCTACAGATTATCATTGAAGTGACTG
AAATGTTGCATAATGCCAGTTTACTCATTGATGATATTGAAGACAGTTCAAAGCTCCGACGTGGTTTCCCAGTGGCTCAC
AGCATCTATGGTGTCCCATCTGTCATTAATTCTGCCAATTACGTCTACTTCCTTGGACTGGAAAAAGTCTTAACCCTTGA
TCACCCGGATGCGGTGAAGCTTTTCACACGCCAGCTTCTGGAACTTCATCAGGGACAAGGCCTCGATATTTACTGGAGGG
ACACCTACACTTGTCCAACTGAAGAAGAATATAAAGCCATGGTGTTGCAGAAGACAGGTGGTTTGTTTGGATTAGCAGTA
GGTCTTATGCAGCTGTTCTCTGATTACAAAGAAGATCTAAAGCCACTGCTTGACACACTTGGGCTCTTTTTCCAGATTAG
AGATGATTATGCCAATCTACACTCCAAAGAATACAGTGAAAACAAAAGTTTCTGTGAAGACTTGACAGAAGGGAAGTTCT
CATTCCCCACTATCCATGCCATTTGGTCAAGGCCAGAAAGCACCCAGGTACAGAACATCCTGCGCCAGAGAACAGAGAAT
ATAGATATTAAAAAGTATTGTGTGCAGTACCTGGAGGATGTAGGTTCTTTTGCATACACTCGACACACTCTTAGAGAGCT
TGAAGCTAAAGCCTACAAACAAATTGAGGCCTGTGGTGGGAACCCTTCACTAGTGGCTTTAGTCAAGCACTTAAGTAAGA
TGTTCACAGAAGAAAATAAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 24 .79 RPM |
| SRP007412_cerebellum | 17 .98 RPM |
| SRP007412_heart | 8 .78 RPM |
| SRP007412_kidney | 10 .09 RPM |
| SRP007412_liver | 3 .39 RPM |
| SRP007412_testis | 5 .31 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000011303 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000008916 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000016813 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000004263 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_1253 | 94.67 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000021302 retrocopies