Parental gene:

ENSFCAG00000000133

Aliases:None
Description:None
Organism:Cat (Felis catus)
Coordinates:B1:26298839..26315259(+)


>ENSFCAG00000000133
ATGTTACCTTTTTCTTCCTACAGTGTGAAGATTGCTCCTGGAGCAGTTGTATGTGTAGAAAGTGAAATCCGGGGTGATGT
AACCATAGGACCTAGGACAGTGATCCACCCTAAAGCACGGATTATTGCGGAAGCCGGGCCAATAGTGATTGGGGAAGGTA
ACCTAATAGAAGAACAGGCGCTTATCATAAATGCTCACCCTGATAATATCACCCCTGATGCTGAAGATCCAGAACCAAAA
CCTATGATCATTGGCACCAATAATGTGTTTGAAGTTGGCTGTTATTCCCAAGCCATGAAAATGGGAGATAATAATGTTAT
TGAATCAAAAGCATATGTGGGCAGAAACGTAATACTGACAAGTGGTTGCATCATTGGGGCTTGCTGTAACCTGAATACAT
TTGAGGTCATCCCTGAGAATACAGTGATCTATGGTGCAGACTGCCTTCGTAGGGTGGTGAGTGAAGAGCAGAGAGTACAG
CCCCAGACACTACAGCTGGATTTCCTGATGAAAATCTTGCCAAACTACCACCACCTAAAGAAGACTATGAAAGGAAGCTC
AACTCCAGTTAAGAACTAA

Library Parental gene expression (RPM)
SRP017611_brain 8 .84 RPM
SRP017611_kidney 7 .01 RPM
SRP017611_liver 3 .34 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000001497 ortholog_one2many 1 retrogene
retro_amel_1860,
Canis familiaris ENSCAFG00000006518 ortholog_one2many 1 retrogene
retro_cfam_2154,
Choloepus hoffmanni ENSCHOG00000002554 ortholog_one2many 3 retrogenes
retro_chof_1387, retro_chof_390, retro_chof_71,
Cavia porcellus ENSCPOG00000011021 ortholog_one2many 2 retrogenes
retro_cpor_1437, retro_cpor_706,
Echinops telfairi ENSETEG00000012307 ortholog_one2many 2 retrogenes
retro_etel_1571, retro_etel_1652,
Homo sapiens ENSG00000104671 ortholog_one2many 1 retrogene
retro_hsap_1780,
Gorilla gorilla ENSGGOG00000013074 ortholog_one2many 1 retrogene
retro_ggor_2236,
Myotis lucifugus ENSMLUG00000028330 ortholog_one2many 2 retrogenes
retro_mluc_1616, retro_mluc_2026,
Macaca mulatta ENSMMUG00000013735 ortholog_one2many 1 retrogene
retro_mmul_1241,
Monodelphis domestica ENSMODG00000019010 ortholog_one2many 1 retrogene
retro_mdom_1260,
Nomascus leucogenys ENSNLEG00000011906 ortholog_one2many 2 retrogenes
retro_nleu_1311, retro_nleu_2969,
Oryctolagus cuniculus ENSOCUG00000010968 ortholog_one2many 1 retrogene
retro_ocun_917,
Ochotona princeps ENSOPRG00000005061 ortholog_many2many 1 retrogene
retro_opri_950,
Pan troglodytes ENSPTRG00000020134 ortholog_one2many 1 retrogene
retro_ptro_1191,
Tarsius syrichta ENSTSYG00000013306 ortholog_one2many 1 retrogene
retro_tsyr_893,
Tursiops truncatus ENSTTRG00000012439 ortholog_one2many 1 retrogene
retro_ttru_780,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_113 96.76 96.35
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Download FASTA sequences of all ENSFCAG00000000133 retrocopies