Parental gene:

BECN1, ENSFCAG00000013136

Aliases:None
Description:beclin 1, autophagy related [Source:HGNC Symbol;Acc:1034]
Organism:Cat (Felis catus)
Coordinates:E1:43293964..43308407(-)


>ENSFCAG00000013136
ATGGAGGGGTCTAAAACGTCCAGCAGCACCATGCAGGTGAGCTTCGTGTGCCAGCGTTGCAGCCAGCCCCTGAAACTGGA
CACGAGCTTCAAGATCCTGGACCGTGTCACTATCCAGGAGCTCACAGCTCCATTACTTGCCACAGCCCAGGTGAAACCAG
GAGAGACCCAAGAGGAAGAGGCTAACTCAGGAGAAGAGCCATTTATTGAAACTCGCCAGGATGGTGTCTCTCGCAGATTC
ATCCCCCCAGCCAGGATGATGTCCACAGAAAGTGCCAACAGCTTCACTCTGATCGGGGAGGCATCTGATGGCGGCACCAT
GGAGAACCTCAGCCGAAGACTGAAGGTCACTGGGGACCTTTTTGACATCATGTCAGGCCAGACAGATGTGGATCACCCAC
TGTGTGAGGAATGCACAGATACCCTTTTAGACCAGCTGGACACTCAGCTCAACGTCACTGAAAATGAGTGTCAGAACTAC
AAACGCTGTTTAGAGATCTTAGAGCAAATGAACGAGGATGACAGTGGACAGCTACAGATGGAGCTGAAGGAGCTGGCGTT
AGAGGAGGAGAGGCTGATCCAGGAGCTGGAAGACGTGGAAAAGAACCGCAAGATAGTGGCAGAAAATCTCGAGAAGGTCC
AGGCTGAGGCTGAGAGACTGGATCAGGAGGAAGCTCAGTATCAGAGGGAATACAGTGAATTTAAGCGACAGCAGCTGGAG
CTGGACGATGAGCTGAAGAGTGTGGAAAACCAGATGCGTTACGCCCAGATGCAGCTGGACAAGCTGAAGAAAACCAACGT
CTTTAATGCAACCTTCCACATCTGGCACAGTGGACAGTTTGGCACAATCAATAACTTCCGACTGGGGCGCCTGCCCAGTG
TTCCTGTGGAATGGAATGAGATCAATGCTGCATGGGGCCAAACAGTGCTGCTACTCCATGCCCTGGCCAATAAGATGGGT
CTGAAATTCCAGAGGTATCGACTTGTTCCCTACGGAAACCATTCATATCTGGAGTCTCTGACAGACAAATCTAAGGAGCT
GCCATTATATTGTTCCGGGGGGTTGCGGTTTTTCTGGGACAACAAGTTTGACCATGCCATGGTGGCTTTCCTGGACTGTG
TGCAGCAGTTCAAAGAAGAGGTTGAGAAAGGCGAGACACGTTTTTGTCTTCCTTACAGGATGGATGTGGAGAAAGGCAAG
ATTGAAGACACAGGAGGCAGTGGCGGCTCCTATTCCATCAAAACCCAGTTTAACTCCGAGGAACAGTGGACAAAAGCTCT
CAAGTTCATGCTGACGAATCTTAAGTGGGGTCTTGCTTGGGTATCCTCACAGTTTTATAACAAATGA

Library Parental gene expression (RPM)
SRP017611_liver 25 .27 RPM
SRP017611_kidney 79 .05 RPM
SRP017611_brain 91 .59 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006867 ortholog_one2one 1 retrogene
retro_amel_16,
Bos taurus ENSBTAG00000019914 ortholog_one2one 1 retrogene
retro_btau_226,
Callithrix jacchus ENSCJAG00000013144 possible_ortholog 1 retrogene
retro_cjac_330,
Dipodomys ordii ENSDORG00000000956 ortholog_one2one 1 retrogene
retro_dord_675,
Homo sapiens ENSG00000126581 ortholog_one2one 1 retrogene
retro_hsap_335,
Macropus eugenii ENSMEUG00000011700 ortholog_one2many 1 retrogene
retro_meug_600,
Macaca mulatta ENSMMUG00000029971 ortholog_one2one 1 retrogene
retro_mmul_81,
Monodelphis domestica ENSMODG00000015064 ortholog_one2many 1 retrogene
retro_mdom_1778,
Mus musculus ENSMUSG00000035086 ortholog_one2one 1 retrogene
retro_mmus_390,
Nomascus leucogenys ENSNLEG00000011840 ortholog_one2one 1 retrogene
retro_nleu_1776,
Oryctolagus cuniculus ENSOCUG00000015964 ortholog_one2one 3 retrogenes
retro_ocun_1021, retro_ocun_1732, retro_ocun_218,
Procavia capensis ENSPCAG00000014049 ortholog_one2one 1 retrogene
retro_pcap_345,
Pan troglodytes ENSPTRG00000022819 ortholog_one2one 1 retrogene
retro_ptro_268,
Sorex araneus ENSSARG00000000367 ortholog_one2one 1 retrogene
retro_sara_136,
Sus scrofa ENSSSCG00000017386 ortholog_one2one 1 retrogene
retro_sscr_75,
Ictidomys tridecemlineatus ENSSTOG00000012612 ortholog_one2one 1 retrogene
retro_itri_25,
Tursiops truncatus ENSTTRG00000011716 ortholog_one2one 1 retrogene
retro_ttru_595,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_62 53.14 99.11
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Download FASTA sequences of all ENSFCAG00000013136 retrocopies