Parental gene:

BECN1, ENSMMUG00000029971

Aliases:BECN1, beclin-1
Description:beclin-1 [Source:RefSeq peptide;Acc:NP_001253614]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:16:52932419..52945849(-)


>ENSMMUG00000029971
ATGGAAGGGTCTAAGACGTCCAACAACAGCACCATGCAGGTGAGCTTCGTGTGCCAGCGCTGCAGCCAGCCCCTGAAACT
GGACACGAGTTTCAAGATCCTGGACCGTGTCACCATCCAGGAACTCACAGCTCCATTACTTACCACAGCCCAGGCGAAAC
CAGGAGAGACCCAGGAGGAAGAGACTAACTCAGGAGAGGAGCCATTTATCGAAACTCCTCGCCAGGATGGTGTCTCTCGC
AGATTCATCCCCCCAGCCAGGATGATGTCCACAGAAAGTGCCAACAGCTTCACTCTGATTGGGGAGGCATCTGATGGCGG
CACCATGGAGAACCTCAGCCGAAGACTGAAGGCAACAGTCACTGGAGACCTTTTTGACATCATGTCGGGCCAGACAGATG
TGGATCACCCACTCTGTGAGGAATGCACAGATACTCTTTTAGACCAGCTGGACACTCAGCTCAACGTCACTGAAAATGAG
TGTCAGAACTACAAACGCTGTTTGGAGATCTTAGAGCAAATGAATGAGGATGACAGTGAACAGCTACAGATGGAGCTAAA
GGAGCTAGCACTAGAGGAGGAGAGGCTGATCCAGGAGCTGGAAGACGTGGAAAAGAACCGCAAGATAGTGGCAGAAAATC
TCGAGAAGGTCCAGGCTGAGGCTGAGAGACTGGATCAGGAGGAAGCTCAGTATCAGAGAGAATACAGCGAATTTAAACGG
CAACAGCTGGAGCTGGATGATGAGCTGAAGAGTGTGGAAAACCAGATGCGTTATGCACAGATTCAGCTGGATAAGCTGAA
GAAAACCAATGTCTTTAATGCAACCTTCCACATCTGGCACAGTGGACAGTTTGGCACAATCAATAACTTCAGGCTGGGTC
GCCTGCCCAGTGTTCCCGTAGAATGGAATGAGATTAATGCTGCTTGGGGCCAGACTGTGTTGCTGCTCCATGCTCTGGCC
AATAAGATGGGTCTGAAATTTCAGAGATATCGACTTGTTCCTTACGGAAACCATTCATATCTGGAGTCTCTGACAGACAA
ATCTAAGGAGCTGCCGTTATACTGTTCTGGGGGGTTGCGGTTTTTCTGGGACAACAAGTTTGACCATGCAATGGTGGCTT
TCCTGGACTGTGTGCAGCAGTTCAAAGAAGAGGTTGAGAAAGGCGAGACACGTTTTTGTCTTCCCTACAGGATGGATGTG
GAGAAAGGCAAGATTGAAGACACAGGAGGCAGCGGCGGCTCCTATTCCATCAAAACCCAGTTTAACTCTGAGGAGCAGTG
GACAAAAGCTCTCAAGTTCATGCTGACAAATCTTAAGTGGGGTCTTGCGTGGGTATCCTCACAATTTTATAACAAATGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 57 .51 RPM
SRP007412_brain 52 .89 RPM
SRP007412_cerebellum 38 .23 RPM
SRP007412_heart 47 .64 RPM
SRP007412_kidney 41 .90 RPM
SRP007412_liver 19 .36 RPM
SRP007412_testis 49 .53 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006867 ortholog_one2one 1 retrogene
retro_amel_16,
Bos taurus ENSBTAG00000019914 ortholog_one2one 1 retrogene
retro_btau_226,
Dipodomys ordii ENSDORG00000000956 ortholog_one2one 1 retrogene
retro_dord_675,
Felis catus ENSFCAG00000013136 ortholog_one2one 1 retrogene
retro_fcat_62,
Homo sapiens ENSG00000126581 ortholog_one2one 1 retrogene
retro_hsap_335,
Macropus eugenii ENSMEUG00000011700 ortholog_one2many 1 retrogene
retro_meug_600,
Monodelphis domestica ENSMODG00000015064 ortholog_one2many 1 retrogene
retro_mdom_1778,
Mus musculus ENSMUSG00000035086 ortholog_one2one 1 retrogene
retro_mmus_390,
Nomascus leucogenys ENSNLEG00000011840 ortholog_one2one 1 retrogene
retro_nleu_1776,
Oryctolagus cuniculus ENSOCUG00000015964 ortholog_one2one 3 retrogenes
retro_ocun_1021, retro_ocun_1732, retro_ocun_218,
Procavia capensis ENSPCAG00000014049 ortholog_one2one 1 retrogene
retro_pcap_345,
Pan troglodytes ENSPTRG00000022819 ortholog_one2one 1 retrogene
retro_ptro_268,
Sorex araneus ENSSARG00000000367 ortholog_one2one 1 retrogene
retro_sara_136,
Sus scrofa ENSSSCG00000017386 ortholog_one2one 1 retrogene
retro_sscr_75,
Ictidomys tridecemlineatus ENSSTOG00000012612 ortholog_one2one 1 retrogene
retro_itri_25,
Tursiops truncatus ENSTTRG00000011716 ortholog_one2one 1 retrogene
retro_ttru_595,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_81 59.10 88.89
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Download FASTA sequences of all ENSMMUG00000029971 retrocopies